RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 TAF4BQ92750 862 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 ATOH1Q92858 354 aaPredicted RBP8.73□□□□□ -1.01
SNX1-207ENST00000559401 DNASE1L2Q92874 299 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 TNIP3Q96KP6 325 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 MKNK1Q9BUB5 465 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 ELOVL4Q9GZR5 314 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 VRTNQ9H8Y1 702 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 TRPV4Q9HBA0 871 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 FAM86C1Q9NVL1 165 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 MAN1B1Q9UKM7 699 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 NDRG2Q9UN36 371 aaKnown RBP8.73□□□□□ -1.01
SNX1-207ENST00000559401 SIT1Q9Y3P8 196 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 NME7Q9Y5B8 376 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 GREB1Q4ZG55 1949 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 NCANO14594 1321 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 KIF26AQ9ULI4 1882 aaPredicted RBP8.72□□□□□ -1.01
SNX1-207ENST00000559401 MYO16Q9Y6X6 1858 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 HELZP42694 1942 aaKnown RBP8.72□□□□□ -1.01
SNX1-207ENST00000559401 COL4A2P08572 1712 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 KANSL1LA0AUZ9 987 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 F8VP50 259 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 CLDN5O00501 218 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 ABL1P00519 1130 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 ASS1P00966 412 aaKnown RBP8.72□□□□□ -1.01
SNX1-207ENST00000559401 F11P03951 625 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 CKMP06732 381 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 FAM163BP0C2L3 166 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 CD58P19256 250 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 CCNE1P24864 410 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 PPP1R2P41236 205 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 KPNA1P52294 538 aaPredicted RBP8.72□□□□□ -1.01
SNX1-207ENST00000559401 NDST1P52848 882 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 NUBP1P53384 320 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 STARD6P59095 220 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 UBE2HP62256 183 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 FKBP3Q00688 224 aaKnown RBP8.72□□□□□ -1.01
SNX1-207ENST00000559401 LRRC63Q05C16 580 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 TCF15Q12870 199 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 CCDC40Q4G0X9 1142 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 C1orf220Q5T0J3 134 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 KRT39Q6A163 491 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 ZNF852Q6ZMS4 543 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 DENND5BQ6ZUT9 1274 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 ACOT1Q86TX2 421 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 FAM35AQ86V20 835 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 CMTM8Q8IZV2 173 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 ADSSL1Q8N142 457 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 DTWD2Q8NBA8 298 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 TTC8Q8TAM2 541 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 SPATA20Q8TB22 786 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 BPIFB1Q8TDL5 484 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 RSPRY1Q96DX4 576 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 TRMT2BQ96GJ1 504 aaKnown RBP8.72□□□□□ -1.01
SNX1-207ENST00000559401 ZFYVE19Q96K21 471 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 SLC46A2Q9BY10 475 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 ZNF518BQ9C0D4 1074 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 DNAI2Q9GZS0 605 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 NIF3L1Q9GZT8 377 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 SDCBP2Q9H190 292 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 IRF2BPLQ9H1B7 796 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 TMEM8AQ9HCN3 771 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 FAM49BQ9NUQ9 324 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 THG1LQ9NWX6 298 aaKnown RBP8.72□□□□□ -1.01
SNX1-207ENST00000559401 EHD2Q9NZN4 543 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 ZMYM5Q9UJ78 669 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 CTNND2Q9UQB3 1225 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 MRPS17Q9Y2R5 130 aaKnown RBP8.72□□□□□ -1.01
SNX1-207ENST00000559401 PIAS3Q9Y6X2 628 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 TRIOO75962 3097 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 ANAPC1Q9H1A4 1944 aa8.72□□□□□ -1.01
SNX1-207ENST00000559401 TRAV19A0A0A6YYK7 116 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 FAM170BA6NMN3 283 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 CHADO15335 359 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 SLC16A3O15427 465 aaKnown RBP8.71□□□□□ -1.02
SNX1-207ENST00000559401 LRRN2O75325 713 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 AP1G2O75843 785 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 DDX6P26196 483 aaKnown RBP eCLIP8.71□□□□□ -1.02
SNX1-207ENST00000559401 ADORA2BP29275 332 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 GTF2H1P32780 548 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 ASPAP45381 313 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 PMS1P54277 932 aaKnown RBP8.71□□□□□ -1.02
SNX1-207ENST00000559401 CAMK4Q16566 473 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 ARHGAP29Q52LW3 1261 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 COBLL1Q53SF7 1204 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 WDR44Q5JSH3 913 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 CC2D1AQ6P1N0 951 aaPredicted RBP8.71□□□□□ -1.02
SNX1-207ENST00000559401 TMEM150AQ86TG1 271 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 MON1AQ86VX9 555 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 CCDC105Q8IYK2 499 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 CELF5Q8N6W0 485 aaKnown RBP8.71□□□□□ -1.02
SNX1-207ENST00000559401 FBXL13Q8NEE6 735 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 NELFBQ8WX92 580 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 JAKMIP2Q96AA8 810 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 DHTKD1Q96HY7 919 aaPredicted RBP8.71□□□□□ -1.02
SNX1-207ENST00000559401 SPATA17Q96L03 361 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 C8orf48Q96LL4 319 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 B3GNT5Q9BYG0 378 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 BCO2Q9BYV7 579 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 KIF9Q9HAQ2 790 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 LTB4R2Q9NPC1 389 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms