RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 F8VP50 259 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 BEST1O76090 585 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 GYPCP04921 128 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 CFHP08603 1231 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 PAEPP09466 180 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 HAPLN1P10915 354 aaPredicted RBP13.18□□□□□ -0.3
GABPB1-208ENST00000558970 VDRP11473 427 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 ATF6P18850 670 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 ANXA13P27216 316 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 PDE6CP51160 858 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 MAP3K7CLP57077 242 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 PTK2Q05397 1052 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 KCNC3Q14003 757 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 CCDC149Q6ZUS6 474 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 PAQR9Q6ZVX9 377 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 TCEAL8Q8IYN2 117 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 FAM71AQ8IYT1 594 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 SPC24Q8NBT2 197 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 SLC20A1Q8WUM9 679 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 BAP1Q92560 729 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 SMARCD1Q96GM5 515 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 TTYH3Q9C0H2 523 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 PDCL3Q9H2J4 239 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 MAGED2Q9UNF1 606 aaPredicted RBP13.18□□□□□ -0.3
GABPB1-208ENST00000558970 BDP1A6H8Y1 2624 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 ITIH6Q6UXX5 1313 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 CCDC195A0A1B0GUA6 201 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 PIK3R2O00459 728 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 ZMYND10O75800 440 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 MICAL2O94851 1124 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 FAM200BP0CF97 657 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 KCNA5P22460 613 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 LTBRP36941 435 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 ALDH1A3P47895 512 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 MTMR3Q13615 1198 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 ASIC2Q16515 512 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 CFAP221Q4G0U5 840 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 SFMBT2Q5VUG0 894 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 E4F1Q66K89 784 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-208ENST00000558970 ANKRD54Q6NXT1 300 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 ELMSAN1Q6PJG2 1045 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 NOP9Q86U38 636 aaKnown RBP13.17□□□□□ -0.3
GABPB1-208ENST00000558970 C2orf15Q8WU43 125 aaKnown RBP13.17□□□□□ -0.3
GABPB1-208ENST00000558970 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
GABPB1-208ENST00000558970 HNRNPABQ99729 332 aaKnown RBP13.17□□□□□ -0.3
GABPB1-208ENST00000558970 SMOQ99835 787 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 NUP58Q9BVL2 599 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 PLEKHA4Q9H4M7 779 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 SFXN1Q9H9B4 322 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 PIDD1Q9HB75 910 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 SEPT11Q9NVA2 429 aaKnown RBP13.17□□□□□ -0.3
GABPB1-208ENST00000558970 HCFC1R1Q9NWW0 138 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 CLEC1BQ9P126 229 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 HESX1Q9UBX0 185 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 CNTN6Q9UQ52 1028 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.17□□□□□ -0.3
GABPB1-208ENST00000558970 DENND4CQ5VZ89 1909 aa13.17□□□□□ -0.3
GABPB1-208ENST00000558970 TULP2O00295 520 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 O00370 1275 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 MMEP08473 750 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 TPM1P09493 284 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 SKILP12757 684 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 CYP11B1P15538 503 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 TUFMP49411 452 aaKnown RBP13.16□□□□□ -0.3
GABPB1-208ENST00000558970 EPHB3P54753 998 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 ADKP55263 362 aaKnown RBP13.16□□□□□ -0.3
GABPB1-208ENST00000558970 NTHL1P78549 312 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 SMARCB1Q12824 385 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 PLD1Q13393 1074 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 TAF12Q16514 161 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 DENND1BQ6P3S1 775 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 CLEC20AQ6ZU45 233 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 TTC30AQ86WT1 665 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 ZNF397Q8NF99 534 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-208ENST00000558970 ZNF606Q8WXB4 792 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 SMG7Q92540 1137 aaKnown RBP13.16□□□□□ -0.3
GABPB1-208ENST00000558970 SECISBP2LQ93073 1101 aaKnown RBP13.16□□□□□ -0.3
GABPB1-208ENST00000558970 MRFAP1L1Q96HT8 127 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 FUBP3Q96I24 572 aaKnown RBP eCLIP13.16□□□□□ -0.3
GABPB1-208ENST00000558970 ASB2Q96Q27 587 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 CORO1BQ9BR76 489 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 FAM124BQ9H5Z6 455 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-208ENST00000558970 UBE2ZQ9H832 354 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-208ENST00000558970 DMAP1Q9NPF5 467 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-208ENST00000558970 DZANK1Q9NVP4 752 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 DPP7Q9UHL4 492 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 CAPN11Q9UMQ6 739 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.16□□□□□ -0.3
GABPB1-208ENST00000558970 LUC7L2Q9Y383 392 aaKnown RBP13.16□□□□□ -0.3
GABPB1-208ENST00000558970 DAAM1Q9Y4D1 1078 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 DENND4AQ7Z401 1863 aa13.16□□□□□ -0.3
GABPB1-208ENST00000558970 NOTCH4Q99466 2003 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 FSD2A1L4K1 749 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 MED7O43513 233 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 FERP16591 822 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 NPR3P17342 541 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 COL9A1P20849 921 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 SP100P23497 879 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-208ENST00000558970 KRT9P35527 623 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms