RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 JAKMIP3Q5VZ66 844 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 B3GNTL1Q67FW5 361 aaPredicted RBP3.64□□□□□ -1.83
HERC1-203ENST00000558532 KCNV1Q6PIU1 500 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 TRIM65Q6PJ69 517 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 KRBA2Q6ZNG9 492 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 MMS22LQ6ZRQ5 1243 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 SPATA31D4Q6ZUB0 917 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 RUFY3Q7L099 469 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 VRK3Q8IV63 474 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 EFCAB13Q8IY85 973 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 C16orf71Q8IYS4 520 aaPredicted RBP3.64□□□□□ -1.83
HERC1-203ENST00000558532 CCDC191Q8NCU4 936 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 CPEB3Q8NE35 698 aaKnown RBP3.64□□□□□ -1.83
HERC1-203ENST00000558532 MNS1Q8NEH6 495 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 NSUN6Q8TEA1 469 aaKnown RBP3.64□□□□□ -1.83
HERC1-203ENST00000558532 PPM1EQ8WY54 764 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 GTF3C6Q969F1 213 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 PPP1R13BQ96KQ4 1090 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 ZSCAN31Q96LW9 406 aaPredicted RBP3.64□□□□□ -1.83
HERC1-203ENST00000558532 PRAM1Q96QH2 718 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 ZSWIM1Q9BR11 485 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 FUT8Q9BYC5 575 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 TRIM5Q9C035 493 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 LSG1Q9H089 658 aaKnown RBP3.64□□□□□ -1.83
HERC1-203ENST00000558532 C11orf54Q9H0W9 315 aaPredicted RBP3.64□□□□□ -1.83
HERC1-203ENST00000558532 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.64□□□□□ -1.83
HERC1-203ENST00000558532 EXOC6BQ9Y2D4 811 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 MAP3K2Q9Y2U5 619 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 FPGT-TNNI3KV9GXZ4 949 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 DDX60Q8IY21 1712 aaKnown RBP3.64□□□□□ -1.83
HERC1-203ENST00000558532 SBNO1A3KN83 1393 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 CEMIPQ8WUJ3 1361 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 RIMBP3CA6NJZ7 1639 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 RIMBP3BA6NNM3 1639 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 RIMBP3Q9UFD9 1639 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 NPHP4O75161 1426 aaPredicted RBP3.63□□□□□ -1.83
HERC1-203ENST00000558532 NPATQ14207 1427 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 COL4A3Q01955 1670 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 MRC1P22897 1456 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 hCG_2014768A0A024R1R8 64 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 LOC102724159A0A0B4J2E5 919 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 A0A1B0GTW7 788 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 CCDC189A1A4V9 331 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 CDHR4A6H8M9 788 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 UNC119BA6NIH7 251 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 EIF3CLB5ME19 914 aaKnown RBP3.63□□□□□ -1.83
HERC1-203ENST00000558532 GRM6O15303 877 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 PPFIA4O75335 1185 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 SPDEFO95238 335 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 GNAI3P08754 354 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 ALAS1P13196 640 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 CASTP20810 708 aaKnown RBP3.63□□□□□ -1.83
HERC1-203ENST00000558532 PDCP20941 246 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 IBSPP21815 317 aaPredicted RBP3.63□□□□□ -1.83
HERC1-203ENST00000558532 FGFR4P22455 802 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 DDX6P26196 483 aaKnown RBP eCLIP3.63□□□□□ -1.83
HERC1-203ENST00000558532 TNNT3P45378 269 aaPredicted RBP3.63□□□□□ -1.83
HERC1-203ENST00000558532 RECQLP46063 649 aaPredicted RBP3.63□□□□□ -1.83
HERC1-203ENST00000558532 FXR1P51114 621 aaKnown RBP eCLIP3.63□□□□□ -1.83
HERC1-203ENST00000558532 NEK2P51955 445 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 INHBCP55103 352 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 TUBB4BP68371 445 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 NOMO3P69849 1222 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 COL10A1Q03692 680 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 SCAPQ12770 1279 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 TP53BP2Q13625 1128 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 SMC1AQ14683 1233 aaKnown RBP3.63□□□□□ -1.83
HERC1-203ENST00000558532 BRD3Q15059 726 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 PWP2Q15269 919 aaKnown RBP3.63□□□□□ -1.83
HERC1-203ENST00000558532 STX1AQ16623 288 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 FLYWCH1Q4VC44 716 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 NOMO2Q5JPE7 1267 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 TSHZ3Q63HK5 1081 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 CCDC91Q7Z6B0 441 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 RSPH3Q86UC2 560 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 CERS3Q8IU89 383 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 MAPKAPK5Q8IW41 473 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 ARHGEF19Q8IW93 802 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 C10orf67Q8IYJ2 551 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 CPA6Q8N4T0 437 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 TSPYL6Q8N831 410 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 MSANTD4Q8NCY6 345 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 CHMP4CQ96CF2 233 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 CHFRQ96EP1 664 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 MPHOSPH8Q99549 860 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 EIF3CQ99613 913 aaKnown RBP3.63□□□□□ -1.83
HERC1-203ENST00000558532 PRRX2Q99811 253 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 IL25Q9H293 177 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 TNMDQ9H2S6 317 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 IKZF4Q9H2S9 585 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 GSTO2Q9H4Y5 243 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 TYW1Q9NV66 732 aaKnown RBP3.63□□□□□ -1.83
HERC1-203ENST00000558532 HYPKQ9NX55 129 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 DDX56Q9NY93 547 aaKnown RBP3.63□□□□□ -1.83
HERC1-203ENST00000558532 ANKFY1Q9P2R3 1169 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 HSFX1Q9UBD0 423 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 ADAM21Q9UKJ8 722 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 RAB21Q9UL25 225 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 SMC3Q9UQE7 1217 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 ATP11BQ9Y2G3 1177 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms