RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 CCT8L2Q96SF2 557 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 RNF39Q9H2S5 420 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 MLXIPLQ9NP71 852 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 GPATCH2LQ9NWQ4 482 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 NINJ2Q9NZG7 142 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 CACNG4Q9UBN1 327 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 ITGA11Q9UKX5 1188 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.11□□□□□ -0.63
TPM1-210ENST00000558264 SCN4AP35499 1836 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 EBAG9O00559 213 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 RECQL4O94761 1208 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 PDGFRBP09619 1106 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 P4HA1P13674 534 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 CHN1P15882 459 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 ATICP31939 592 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 GRM5P41594 1212 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 IFNAR2P48551 515 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 OTUD4Q01804 1114 aaKnown RBP11.11□□□□□ -0.63
TPM1-210ENST00000558264 QPCTQ16769 361 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 CCDC142Q17RM4 750 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 ZNF618Q5T7W0 954 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 IQSEC1Q6DN90 963 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 CCDC89Q8N998 374 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 ACTL9Q8TC94 416 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 CFAP57Q96MR6 1250 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 NT5C1AQ9BXI3 368 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 B3GNT5Q9BYG0 378 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 GCOM2Q9BZD3 368 aaPredicted RBP11.11□□□□□ -0.63
TPM1-210ENST00000558264 MIS12Q9H081 205 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 FEZ2Q9UHY8 353 aaPredicted RBP11.11□□□□□ -0.63
TPM1-210ENST00000558264 MYO1CO00159 1063 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 CITO14578 2027 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 PIAS1O75925 651 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 PFKMP08237 780 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 VDRP11473 427 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 YARSP54577 528 aaKnown RBP11.1□□□□□ -0.63
TPM1-210ENST00000558264 TAP1Q03518 808 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 MFSD10Q14728 455 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 PMF1Q6P1K2 205 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 SCYL2Q6P3W7 929 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 SLC27A1Q6PCB7 646 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 NPNTQ6UXI9 565 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 RFX6Q8HWS3 928 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 SCUBE3Q8IX30 993 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 KCTD6Q8NC69 237 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 OR6B3Q8NGW1 331 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 IPO4Q8TEX9 1081 aaKnown RBP11.1□□□□□ -0.63
TPM1-210ENST00000558264 ADAM7Q9H2U9 754 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 C2CD2Q9Y426 696 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 PECAM1P16284 738 aaPredicted RBP11.1□□□□□ -0.63
TPM1-210ENST00000558264 LRRC14Q15048 493 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 TAF1CQ15572 869 aaPredicted RBP11.1□□□□□ -0.63
TPM1-210ENST00000558264 CNGA2Q16280 664 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 SPDYCQ5MJ68 293 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 EMC10Q5UCC4 262 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 LRRC38Q5VT99 294 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 SYDE1Q6ZW31 735 aaPredicted RBP11.1□□□□□ -0.63
TPM1-210ENST00000558264 ZNF410Q86VK4 478 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 TTC30AQ86WT1 665 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 NIPA2Q8N8Q9 360 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 RXFP2Q8WXD0 754 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 SNX27Q96L92 541 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 RBM15Q96T37 977 aaKnown RBP eCLIP11.1□□□□□ -0.63
TPM1-210ENST00000558264 CYP3A43Q9HB55 503 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 SAYSD1Q9NPB0 183 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 HOMER3Q9NSC5 361 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 SLC5A4Q9NY91 659 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 USP18Q9UMW8 372 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 GNEQ9Y223 722 aaKnown RBP11.1□□□□□ -0.63
TPM1-210ENST00000558264 ZSWIM8A7E2V4 1837 aa11.1□□□□□ -0.63
TPM1-210ENST00000558264 SLC15A5A6NIM6 579 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 A6NJR5 290 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 TTC4O95801 387 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 F2P00734 622 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 CCDC130P13994 396 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 PDGFRAP16234 1089 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 KDELR1P24390 212 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 IGFBP6P24592 240 aaPredicted RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 ADORA2BP29275 332 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 VCPP55072 806 aaKnown RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 MYO1EQ12965 1108 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 MAP2K5Q13163 448 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 HADHQ16836 314 aaKnown RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 TRMT10CQ7L0Y3 403 aaKnown RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 ALLCQ8N6M5 410 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 CLEC4CQ8WTT0 213 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 PGM2Q96G03 612 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 NGRNQ9NPE2 291 aaKnown RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.09□□□□□ -0.63
TPM1-210ENST00000558264 DDX56Q9NY93 547 aaKnown RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 SPTLC1O15269 473 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 RNF8O76064 485 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 HMGCRP04035 888 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 HOXD8P13378 290 aaPredicted RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 DARSP14868 501 aaKnown RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 TFE3P19532 575 aaPredicted RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 LMO2P25791 158 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 ZNF157P51786 506 aaPredicted RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 INCA1Q0VD86 236 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms