RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 SLC22A12Q96S37 553 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 SNX25Q9H3E2 840 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 VRTNQ9H8Y1 702 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 LMAN1LQ9HAT1 526 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 PRMT8Q9NR22 394 aaPredicted RBP17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 TMEM30AQ9NV96 361 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 UXTQ9UBK9 157 aaPredicted RBP17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 ZMYM5Q9UJ78 669 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 TRAF3IP3Q9Y228 551 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 PHACTR2O75167 634 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 ZNF202O95125 648 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 CTHP32929 405 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 GNL1P36915 607 aaPredicted RBP17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 KPNA1P52294 538 aaPredicted RBP17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 CDH8P55286 799 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 USP46P62068 366 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 CSTF1Q05048 431 aaKnown RBP17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 NCOA4Q13772 614 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 GAS6Q14393 721 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 MAPRE1Q15691 268 aaKnown RBP17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 ZNF699Q32M78 642 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 C1orf220Q5T0J3 134 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 VSTM1Q6UX27 236 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 SCARA5Q6ZMJ2 495 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 SYAP1Q96A49 352 aaPredicted RBP17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 SDCBP2Q9H190 292 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 C8orf33Q9H7E9 229 aaPredicted RBP17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 TRPC7Q9HCX4 862 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 HPS4Q9NQG7 708 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 RBM12Q9NTZ6 932 aaKnown RBP17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 MAPK8IP1Q9UQF2 711 aa17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 ZFHX2Q9C0A1 2572 aaPredicted RBP17.3■□□□□ 0.36
AC027088.1-201ENST00000557966 SOBPA7XYQ1 873 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 A8MXQ7 604 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 FAM163BP0C2L3 166 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 PTPN1P18031 435 aaKnown RBP17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 GRIK1P39086 918 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 AP3M2P53677 418 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 PLCB2Q00722 1185 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 ZNF528Q3MIS6 628 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 ZACNQ401N2 412 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 CEP135Q66GS9 1140 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 TRIM68Q6AZZ1 485 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 ZC3H14Q6PJT7 736 aaKnown RBP17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 CHFRQ96EP1 664 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 SPATA17Q96L03 361 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 FAM83CQ9BQN1 747 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 ZNF518BQ9C0D4 1074 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 KIF9Q9HAQ2 790 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 GKN1Q9NS71 199 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 TDP1Q9NUW8 608 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 FANCMQ8IYD8 2048 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 GREB1Q4ZG55 1949 aa17.29■□□□□ 0.36
AC027088.1-201ENST00000557966 CACNA1IQ9P0X4 2223 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 C2orf78A6NCI8 922 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 OTOL1A6NHN0 477 aaPredicted RBP17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 F8VP50 259 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 CLDN5O00501 218 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 CALUO43852 315 aaPredicted RBP17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 LMNAP02545 664 aaKnown RBP17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 TDGF1P13385 188 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 USP4Q13107 963 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 ZNF268Q14587 947 aaPredicted RBP17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 KCNB1Q14721 858 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 NFIL3Q16649 462 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 ZNF667Q5HYK9 610 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 Q6ZS52 159 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 DENND5BQ6ZUT9 1274 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 RALGPS2Q86X27 583 aaPredicted RBP17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 ADSSL1Q8N142 457 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 B3GALNT2Q8NCR0 500 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 TMC2Q8TDI7 906 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 NELL1Q92832 810 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 CCDC47Q96A33 483 aaKnown RBP17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 CYP2S1Q96SQ9 504 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 TTLL2Q9BWV7 592 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 B3GNT5Q9BYG0 378 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 GCNT4Q9P109 453 aa17.28■□□□□ 0.36
AC027088.1-201ENST00000557966 TRIM66O15016 1216 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 AKAP3O75969 853 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 ARSAP15289 507 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 NR2F2P24468 414 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 FAM160A1Q05DH4 1040 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 PON2Q15165 354 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 ZNF77Q15935 545 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 ITPRIPL2Q3MIP1 535 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 ZCWPW2Q504Y3 356 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 SPOPLQ6IQ16 392 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 SV2AQ7L0J3 742 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 SMYD4Q8IYR2 804 aaPredicted RBP17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 GUF1Q8N442 669 aaKnown RBP17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 ARL14EPQ8N8R7 260 aaPredicted RBP17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 C8orf48Q96LL4 319 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 SEMA4AQ9H3S1 761 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 EBF3Q9H4W6 596 aa17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 THG1LQ9NWX6 298 aaKnown RBP17.27■□□□□ 0.36
AC027088.1-201ENST00000557966 F5P12259 2224 aa17.27■□□□□ 0.35
AC027088.1-201ENST00000557966 ANAPC1Q9H1A4 1944 aa17.26■□□□□ 0.35
AC027088.1-201ENST00000557966 TRAV19A0A0A6YYK7 116 aa17.26■□□□□ 0.35
AC027088.1-201ENST00000557966 CLSTN1O94985 981 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms