RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CD44P16070 742 aaKnown RBP17.82■□□□□ 0.44
NEK9-211ENST00000557673 PTMSP20962 102 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 PPP1R2P41236 205 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 SRSF5Q13243 272 aaKnown RBP17.82■□□□□ 0.44
NEK9-211ENST00000557673 STIM1Q13586 685 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 NFIL3Q16649 462 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 MGAT5BQ3V5L5 792 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 SLC39A12Q504Y0 691 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 CCDC183Q5T5S1 534 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 NT5DC4Q86YG4 428 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 CBWD2Q8IUF1 395 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 XXYLT1Q8NBI6 393 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 LRRC3BQ96PB8 259 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 TMEM209Q96SK2 561 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 DMAC2Q9NW81 257 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 PSMA7O14818 248 aa17.81■□□□□ 0.44
NEK9-211ENST00000557673 SOAT2O75908 522 aa17.81■□□□□ 0.44
NEK9-211ENST00000557673 TAF6P49848 677 aa17.81■□□□□ 0.44
NEK9-211ENST00000557673 GRSF1Q12849 480 aaKnown RBP eCLIP17.81■□□□□ 0.443e-7■□□□□ 8
NEK9-211ENST00000557673 SNRNP35Q16560 246 aaKnown RBP17.81■□□□□ 0.44
NEK9-211ENST00000557673 EDRF1Q3B7T1 1238 aa17.81■□□□□ 0.44
NEK9-211ENST00000557673 AASDHQ4L235 1098 aaPredicted RBP17.81■□□□□ 0.44
NEK9-211ENST00000557673 TTC9BQ8N6N2 239 aa17.81■□□□□ 0.44
NEK9-211ENST00000557673 C12orf50Q8NA57 414 aaPredicted RBP17.81■□□□□ 0.44
NEK9-211ENST00000557673 EXOC4Q96A65 974 aa17.81■□□□□ 0.44
NEK9-211ENST00000557673 ZCWPW1Q9H0M4 648 aa17.81■□□□□ 0.44
NEK9-211ENST00000557673 KIAA1586Q9HCI6 787 aa17.81■□□□□ 0.44
NEK9-211ENST00000557673 PDE11AQ9HCR9 933 aa17.81■□□□□ 0.44
NEK9-211ENST00000557673 TMEM63CQ9P1W3 806 aa17.81■□□□□ 0.44
NEK9-211ENST00000557673 PPP1R3GB7ZBB8 358 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 CYB561D2O14569 222 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 PRAMEF12O95522 483 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 ITGB3P05106 788 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 DDX6P26196 483 aaKnown RBP eCLIP17.8■□□□□ 0.44
NEK9-211ENST00000557673 POLR2BP30876 1174 aaKnown RBP17.8■□□□□ 0.44
NEK9-211ENST00000557673 AVPR1AP37288 418 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 LIMK1P53667 647 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 PMS1P54277 932 aaKnown RBP17.8■□□□□ 0.44
NEK9-211ENST00000557673 TNK2Q07912 1038 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 ST3GAL2Q16842 350 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 KLHL40Q2TBA0 621 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 WDR44Q5JSH3 913 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 LMBRD2Q68DH5 695 aaPredicted RBP17.8■□□□□ 0.44
NEK9-211ENST00000557673 SCARA3Q6AZY7 606 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 CACNA2D4Q7Z3S7 1137 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 CMTM8Q8IZV2 173 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 C1orf127Q8N9H9 656 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 OR10T2Q8NGX3 314 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 SPPL2BQ8TCT7 592 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 GAB3Q8WWW8 586 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 LPIN3Q9BQK8 851 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 SLC8A2Q9UPR5 921 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 CTNND2Q9UQB3 1225 aa17.8■□□□□ 0.44
NEK9-211ENST00000557673 PTPRJQ12913 1337 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 TRIM49BA6NDI0 452 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 ZNF233A6NK53 670 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 SOBPA7XYQ1 873 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 GDF9O60383 454 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 EXOC3O60645 756 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 RPP40O75818 363 aaKnown RBP17.79■□□□□ 0.44
NEK9-211ENST00000557673 NR2F2P24468 414 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 CDR1P51861 262 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 CYP4F8P98187 520 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 LRRC63Q05C16 580 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 BFSP1Q12934 665 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 DPCR1Q3MIW9 517 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 SV2CQ496J9 727 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 WSCD1Q658N2 575 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 KLHL10Q6JEL2 608 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 ZC3H3Q8IXZ2 948 aaKnown RBP17.79■□□□□ 0.44
NEK9-211ENST00000557673 DCP1BQ8IZD4 617 aaKnown RBP17.79■□□□□ 0.44
NEK9-211ENST00000557673 DHTKD1Q96HY7 919 aaPredicted RBP17.79■□□□□ 0.44
NEK9-211ENST00000557673 ZNF560Q96MR9 790 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 SLC46A2Q9BY10 475 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 MTMR12Q9C0I1 747 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 GKN1Q9NS71 199 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 AGAP1Q9UPQ3 857 aa17.79■□□□□ 0.44
NEK9-211ENST00000557673 KPNA7A9QM74 516 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 AXIN1O15169 862 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 AKAP3O75969 853 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 ZNF806P0C7X5 589 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 CCDC192P0DO97 292 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 ATF6P18850 670 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 CYP24A1Q07973 514 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 PAK1Q13153 545 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 RUNX3Q13761 415 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 TMEM196Q5HYL7 178 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 CAVIN1Q6NZI2 390 aaKnown RBP17.78■□□□□ 0.44
NEK9-211ENST00000557673 CC2D1AQ6P1N0 951 aaPredicted RBP17.78■□□□□ 0.44
NEK9-211ENST00000557673 FOXR2Q6PJQ5 311 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 CAMKK1Q8N5S9 505 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 CXorf38Q8TB03 319 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 CACTINQ8WUQ7 758 aaKnown RBP17.78■□□□□ 0.44
NEK9-211ENST00000557673 TSG101Q99816 390 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 FAM83CQ9BQN1 747 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 ARRDC1-AS1Q9H2J1 176 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 KIF9Q9HAQ2 790 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 IL21Q9HBE4 155 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 C2orf42Q9NWW7 574 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 PCDHGA5Q9Y5G8 931 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms