RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.2■□□□□ 0.18
NEDD1-213ENST00000557644 F8VP50 259 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 ATF6P18850 670 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 KRT9P35527 623 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 LTBRP36941 435 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 GRIK1P39086 918 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 ADKP55263 362 aaKnown RBP16.2■□□□□ 0.18
NEDD1-213ENST00000557644 ZBED6P86452 979 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 TWF1Q12792 350 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 IRF2BP2Q7Z5L9 587 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 ZMIZ2Q8NF64 920 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 SLC20A1Q8WUM9 679 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 SMARCD1Q96GM5 515 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 SMOQ99835 787 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 CLEC1BQ9P126 229 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 MYO6Q9UM54 1294 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 FAM170AA1A519 330 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 SPDYE4A6NLX3 237 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 MICAL2O94851 1124 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 C1RP00736 705 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 MAP3K7CLP57077 242 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 COL19A1Q14993 1142 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 SKIV2LQ15477 1246 aaKnown RBP16.19■□□□□ 0.18
NEDD1-213ENST00000557644 CNGA2Q16280 664 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 SFMBT2Q5VUG0 894 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 LCLAT1Q6UWP7 414 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 TMEM184AQ6ZMB5 413 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 CLEC20AQ6ZU45 233 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 DDX1Q92499 740 aaKnown RBP16.19■□□□□ 0.18
NEDD1-213ENST00000557644 CASP10Q92851 521 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 TULP2O00295 520 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 CCL16O15467 120 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 ZMYND10O75800 440 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 FAM200BP0CF97 657 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 TUFMP49411 452 aaKnown RBP16.19■□□□□ 0.18
NEDD1-213ENST00000557644 PDE6CP51160 858 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 TRIM14Q14142 442 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 PPM1LQ5SGD2 360 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 VSTM1Q6UX27 236 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 CCDC149Q6ZUS6 474 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 PASD1Q8IV76 773 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 SPC24Q8NBT2 197 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 ZNF397Q8NF99 534 aaPredicted RBP16.19■□□□□ 0.18
NEDD1-213ENST00000557644 GIPC2Q8TF65 315 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 IQCDQ96DY2 449 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 AIPL1Q9NZN9 384 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 HSFX1Q9UBD0 423 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 CDH22Q9UJ99 828 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 NOCTQ9UK39 431 aaKnown RBP16.19■□□□□ 0.18
NEDD1-213ENST00000557644 MAFFQ9ULX9 164 aa16.19■□□□□ 0.18
NEDD1-213ENST00000557644 M0QYV0 167 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 SKILP12757 684 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 NPR3P17342 541 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 MAGEA11P43364 429 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 BPIFB4P59827 614 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 DENND1BQ6P3S1 775 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 SYCE2Q6PIF2 218 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 TMC5Q6UXY8 1006 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 DRC7Q8IY82 874 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 ANKRD52Q8NB46 1076 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 PABPC5Q96DU9 382 aaKnown RBP16.18■□□□□ 0.18
NEDD1-213ENST00000557644 DUSP16Q9BY84 665 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 CCDC195A0A1B0GUA6 201 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 MFAP3LO75121 409 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 MMEP08473 750 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 ALDH1A3P47895 512 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 MRE11P49959 708 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 PDE4CQ08493 712 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 MTMR3Q13615 1198 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 ASIC2Q16515 512 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 PKDCCQ504Y2 493 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 ANKRD54Q6NXT1 300 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 HDAC7Q8WUI4 952 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 CSNK1G1Q9HCP0 422 aa16.18■□□□□ 0.18
NEDD1-213ENST00000557644 DMAP1Q9NPF5 467 aaPredicted RBP16.18■□□□□ 0.18
NEDD1-213ENST00000557644 PTPRDP23468 1912 aa16.17■□□□□ 0.18
NEDD1-213ENST00000557644 ATP8B3O60423 1300 aa16.17■□□□□ 0.18
NEDD1-213ENST00000557644 FERP16591 822 aa16.17■□□□□ 0.18
NEDD1-213ENST00000557644 CHRNB2P17787 502 aa16.17■□□□□ 0.18
NEDD1-213ENST00000557644 CDC25BP30305 580 aa16.17■□□□□ 0.18
NEDD1-213ENST00000557644 CLUL1Q15846 466 aa16.17■□□□□ 0.18
NEDD1-213ENST00000557644 RARS2Q5T160 578 aaKnown RBP16.17■□□□□ 0.18
NEDD1-213ENST00000557644 HESX1Q9UBX0 185 aa16.17■□□□□ 0.18
NEDD1-213ENST00000557644 DPP7Q9UHL4 492 aa16.17■□□□□ 0.18
NEDD1-213ENST00000557644 MTCL1Q9Y4B5 1905 aaKnown RBP16.17■□□□□ 0.18
NEDD1-213ENST00000557644 H3BQ06 376 aaPredicted RBP16.16■□□□□ 0.18
NEDD1-213ENST00000557644 MED7O43513 233 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 NCK2O43639 380 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 LRG1P02750 347 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 SMYD5Q6GMV2 418 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 GPRIN1Q7Z2K8 1008 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 SECISBP2LQ93073 1101 aaKnown RBP16.16■□□□□ 0.18
NEDD1-213ENST00000557644 ZNF707Q96C28 371 aaPredicted RBP16.16■□□□□ 0.18
NEDD1-213ENST00000557644 SFXN1Q9H9B4 322 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 DZANK1Q9NVP4 752 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 TRIM66O15016 1216 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 TPM1P09493 284 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 SRGAP2BP0DMP2 458 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 BCAT1P54687 386 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 FMO1Q01740 532 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms