RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 F11P03951 625 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 NDUFV2P19404 249 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 CYP3A7P24462 503 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 CDC27P30260 824 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 RPL9P32969 192 aaKnown RBP10.23□□□□□ -0.77
NEDD1-211ENST00000557454 SLC6A11P48066 632 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 OSTNP61366 133 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 KDSRQ06136 332 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 SUZ12Q15022 739 aaKnown RBP10.23□□□□□ -0.77
NEDD1-211ENST00000557454 E2F4Q16254 413 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 XKR4Q5GH76 650 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 PPP4R3AQ6IN85 833 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 ALKAL1Q6UXT8 129 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 MAEAQ7L5Y9 396 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 MON1AQ86VX9 555 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 C12orf40Q86WS4 652 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 STKLD1Q8NE28 680 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 ENGASEQ8NFI3 743 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 BICD2Q8TD16 824 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 OXER1Q8TDS5 423 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 TSC1Q92574 1164 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 MRPS31Q92665 395 aaKnown RBP10.23□□□□□ -0.77
NEDD1-211ENST00000557454 OXCT2Q9BYC2 517 aaPredicted RBP10.23□□□□□ -0.77
NEDD1-211ENST00000557454 ZSWIM4Q9H7M6 989 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 ITPR2Q14571 2701 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 ZFHX3Q15911 3703 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 CSMD1Q96PZ7 3565 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 A0A1B0GVT2 93 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 GOLGA8AA7E2F4 631 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 GOLGA8BA8MQT2 603 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 M0QZQ0 153 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 ACKR2O00590 384 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 USO1O60763 962 aaKnown RBP10.22□□□□□ -0.77
NEDD1-211ENST00000557454 TADA3O75528 432 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 APODP05090 189 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 CYP17A1P05093 508 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 HOXB2P14652 356 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 YARSP54577 528 aaKnown RBP10.22□□□□□ -0.77
NEDD1-211ENST00000557454 PCBP4P57723 403 aaKnown RBP10.22□□□□□ -0.77
NEDD1-211ENST00000557454 VAC14Q08AM6 782 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 MYBPC2Q14324 1141 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 EPHA7Q15375 998 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 SF3A1Q15459 793 aaKnown RBP10.22□□□□□ -0.77
NEDD1-211ENST00000557454 USP37Q86T82 979 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 SH3RF2Q8TEC5 729 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 SNRNP27Q8WVK2 155 aaKnown RBP10.22□□□□□ -0.77
NEDD1-211ENST00000557454 DNASE2BQ8WZ79 361 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 SLC22A12Q96S37 553 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 CYP2S1Q96SQ9 504 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 PNKPQ96T60 521 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 CCDC113Q9H0I3 377 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 TRPC7Q9HCX4 862 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 TOPORSQ9NS56 1045 aaPredicted RBP10.22□□□□□ -0.77
NEDD1-211ENST00000557454 DDX25Q9UHL0 483 aaKnown RBP10.22□□□□□ -0.77
NEDD1-211ENST00000557454 MAN2B2Q9Y2E5 1009 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 PCDHGA1Q9Y5H4 931 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 NBASA2RRP1 2371 aa10.22□□□□□ -0.77
NEDD1-211ENST00000557454 MYMKA6NI61 221 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 BTBD18B2RXH4 712 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 CBX4O00257 560 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 BCAT2O15382 392 aaPredicted RBP10.21□□□□□ -0.77
NEDD1-211ENST00000557454 ZBTB43O43298 467 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 RFPL3O75679 317 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 CKMP06732 381 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 KCNE1P15382 129 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 HMGA1P17096 107 aaKnown RBP10.21□□□□□ -0.77
NEDD1-211ENST00000557454 HSPA4P34932 840 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 WASP42768 502 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 TUFMP49411 452 aaKnown RBP10.21□□□□□ -0.77
NEDD1-211ENST00000557454 DNAJC3Q13217 504 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 DMP1Q13316 513 aaPredicted RBP10.21□□□□□ -0.77
NEDD1-211ENST00000557454 ZC2HC1CQ53FD0 456 aaPredicted RBP10.21□□□□□ -0.77
NEDD1-211ENST00000557454 ATF7IP2Q5U623 682 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 NCAPH2Q6IBW4 605 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 TPH2Q8IWU9 490 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 EXD3Q8N9H8 876 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 BSNDQ8WZ55 320 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 HIC2Q96JB3 615 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 ZFRQ96KR1 1074 aaKnown RBP10.21□□□□□ -0.77
NEDD1-211ENST00000557454 CCDC43Q96MW1 224 aaKnown RBP10.21□□□□□ -0.77
NEDD1-211ENST00000557454 PSMG3-AS1Q96PY0 264 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 CCDC94Q9BW85 323 aaPredicted RBP10.21□□□□□ -0.77
NEDD1-211ENST00000557454 SLC6A17Q9H1V8 727 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 C2orf40Q9H1Z8 148 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 OSBPL3Q9H4L5 887 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 ARHGEF4Q9NR80 690 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 HSFX1Q9UBD0 423 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 TUBGCP4Q9UGJ1 667 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 SEPT3Q9UH03 358 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 RCAN3Q9UKA8 241 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 BRPF3Q9ULD4 1205 aa10.21□□□□□ -0.77
NEDD1-211ENST00000557454 MAGED2Q9UNF1 606 aaPredicted RBP10.21□□□□□ -0.77
NEDD1-211ENST00000557454 RBM8AQ9Y5S9 174 aaKnown RBP10.21□□□□□ -0.77
NEDD1-211ENST00000557454 POLQO75417 2590 aa10.21□□□□□ -0.78
NEDD1-211ENST00000557454 A0A1W2PQF6 199 aa10.2□□□□□ -0.78
NEDD1-211ENST00000557454 ANO9A1A5B4 782 aa10.2□□□□□ -0.78
NEDD1-211ENST00000557454 CCER2I3L3R5 266 aa10.2□□□□□ -0.78
NEDD1-211ENST00000557454 KLK10O43240 276 aa10.2□□□□□ -0.78
NEDD1-211ENST00000557454 SUV39H1O43463 412 aa10.2□□□□□ -0.78
NEDD1-211ENST00000557454 NCAM1P13591 858 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms