RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 TNNC1P63316 161 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 CYP27A1Q02318 531 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 FAM160A1Q05DH4 1040 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 RUNX3Q13761 415 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 CCINQ13939 588 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 KNOP1Q1ED39 458 aaKnown RBP15.15■□□□□ 0.02
SNX6-210ENST00000557341 WDR44Q5JSH3 913 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 CC2D1AQ6P1N0 951 aaPredicted RBP15.15■□□□□ 0.02
SNX6-210ENST00000557341 VSTM1Q6UX27 236 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 ERMP1Q7Z2K6 904 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 SYNPOQ8N3V7 929 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 GOLGA5Q8TBA6 731 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 CEP295NLQ96MC4 621 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 FAM83CQ9BQN1 747 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 EBF3Q9H4W6 596 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 TRPC7Q9HCX4 862 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 CRTAC1Q9NQ79 661 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 HPS4Q9NQG7 708 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 GKN1Q9NS71 199 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 TRAV19A0A0A6YYK7 116 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 EXOC3O60645 756 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 SLFN14P0C7P3 912 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 LMO2P25791 158 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 ANXA13P27216 316 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 USP4Q13107 963 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 TRPC3Q13507 836 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 KCNB1Q14721 858 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 MTF1Q14872 753 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 TRIM68Q6AZZ1 485 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 GRAMD1CQ8IYS0 662 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 SPRYD3Q8NCJ5 442 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 RIN3Q8TB24 985 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 PCED1BQ96HM7 432 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 SPATA17Q96L03 361 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 SNX25Q9H3E2 840 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 EXOC1Q9NV70 894 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 GMEB2Q9UKD1 530 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 RAB23Q9ULC3 237 aa15.14■□□□□ 0.01
SNX6-210ENST00000557341 TRIM66O15016 1216 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 ACTN4O43707 911 aaKnown RBP15.13■□□□□ 0.01
SNX6-210ENST00000557341 TACC1O75410 805 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 STAU1O95793 577 aaKnown RBP15.13■□□□□ 0.01
SNX6-210ENST00000557341 CST3P01034 146 aaPredicted RBP15.13■□□□□ 0.01
SNX6-210ENST00000557341 PDGFRBP09619 1106 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 USP17L7P0C7H9 530 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 BDNFP23560 247 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 GRIK1P39086 918 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 PDE6CP51160 858 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 AMPD2Q01433 879 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 PDGFRLQ15198 375 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 WDR72Q3MJ13 1102 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 MDH1BQ5I0G3 518 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 DENND5BQ6ZUT9 1274 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 GPR161Q8N6U8 529 aaKnown RBP15.13■□□□□ 0.01
SNX6-210ENST00000557341 OR6B3Q8NGW1 331 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 MYCBPAPQ8TBZ2 947 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 SYAP1Q96A49 352 aaPredicted RBP15.13■□□□□ 0.01
SNX6-210ENST00000557341 RMDN1Q96DB5 314 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 MRPL45Q9BRJ2 306 aaKnown RBP15.13■□□□□ 0.01
SNX6-210ENST00000557341 EHD2Q9NZN4 543 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 SERTAD1Q9UHV2 236 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 RCOR1Q9UKL0 485 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 MYOFQ9NZM1 2061 aa15.13■□□□□ 0.01
SNX6-210ENST00000557341 KLRC4O43908 158 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 PHACTR2O75167 634 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 CLSTN1O94985 981 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 FAM163BP0C2L3 166 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 PFKFB1P16118 471 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 ATICP31939 592 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 GNL1P36915 607 aaPredicted RBP15.12■□□□□ 0.01
SNX6-210ENST00000557341 GRSF1Q12849 480 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNX6-210ENST00000557341 ZNF77Q15935 545 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 TMEM196Q5HYL7 178 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 CPA6Q8N4T0 437 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 KIAA0895Q8NCT3 520 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 TTC16Q8NEE8 873 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 ATP2A3Q93084 1043 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 ELOVL4Q9GZR5 314 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 GZF1Q9H116 711 aaPredicted RBP15.12■□□□□ 0.01
SNX6-210ENST00000557341 NME7Q9Y5B8 376 aa15.12■□□□□ 0.01
SNX6-210ENST00000557341 C2orf78A6NCI8 922 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 OTOL1A6NHN0 477 aaPredicted RBP15.11■□□□□ 0.01
SNX6-210ENST00000557341 CHURC1-FNTBB4DL54 471 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 K7ESF4 209 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 MYL1P05976 194 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 ARSAP15289 507 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 PFKLP17858 780 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 CNR2P34972 360 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 IFNAR2P48551 515 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 FNTBP49356 437 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 CASP4P49662 377 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 AP3M2P53677 418 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 MYL6P60660 151 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 NOP14P78316 857 aaKnown RBP15.11■□□□□ 0.01
SNX6-210ENST00000557341 KRT85P78386 507 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 PSMD2Q13200 908 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 BIRC3Q13489 604 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 ZNF699Q32M78 642 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 LAIR1Q6GTX8 287 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 PRR23BQ6ZRT6 265 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms