RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 AASDHPPTQ9NRN7 309 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 PCDHA13Q9Y5I0 950 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 A0A1W2PP64 1363 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 RAB3GAP2Q9H2M9 1393 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 CENPVL1A0A0U1RR11 272 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 ZNF185O15231 689 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 GRM6O15303 877 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 ORC4O43929 436 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 POU2F2P09086 479 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 NR4A1P22736 598 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 EDNRBP24530 442 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 POU6F2P78424 691 aaPredicted RBP4.77□□□□□ -1.65
CHD8-212ENST00000557329 KLF10Q13118 480 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 TARDBPQ13148 414 aaKnown RBP eCLIP4.77□□□□□ -1.65
CHD8-212ENST00000557329 NOGQ13253 232 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 PLEKHO1Q53GL0 409 aaPredicted RBP4.77□□□□□ -1.65
CHD8-212ENST00000557329 TBC1D9BQ66K14 1250 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 SP5Q6BEB4 398 aaPredicted RBP4.77□□□□□ -1.65
CHD8-212ENST00000557329 ZNF530Q6P9A1 599 aaPredicted RBP4.77□□□□□ -1.65
CHD8-212ENST00000557329 ZNF365Q70YC5 407 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 UBE3BQ7Z3V4 1068 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 CLNKQ7Z7G1 428 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 ZGPATQ8N5A5 531 aaKnown RBP4.77□□□□□ -1.65
CHD8-212ENST00000557329 CNBD1Q8NA66 436 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 TBC1D15Q8TC07 691 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 MTFMTQ96DP5 389 aaKnown RBP4.77□□□□□ -1.65
CHD8-212ENST00000557329 CHFRQ96EP1 664 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 ALOXE3Q9BYJ1 711 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 TMX4Q9H1E5 349 aaPredicted RBP4.77□□□□□ -1.65
CHD8-212ENST00000557329 RNF186Q9NXI6 227 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 NARFQ9UHQ1 456 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 ZDHHC8Q9ULC8 765 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 RUVBL1Q9Y265 456 aaKnown RBP4.77□□□□□ -1.65
CHD8-212ENST00000557329 EDC4Q6P2E9 1401 aaKnown RBP4.77□□□□□ -1.65
CHD8-212ENST00000557329 CARMIL3Q8ND23 1372 aa4.77□□□□□ -1.65
CHD8-212ENST00000557329 TCRBV7S2A1N4TA0A589 114 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 CD1AP06126 327 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 MALP21145 153 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 FGFR4P22455 802 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 FDXRP22570 491 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 ZEB1P37275 1124 aaPredicted RBP4.76□□□□□ -1.65
CHD8-212ENST00000557329 CXADRP78310 365 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 SLC39A6Q13433 755 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 GTF2H3Q13889 308 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 PGS1Q32NB8 556 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 PRR5LQ6MZQ0 368 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 SLC4A10Q6U841 1118 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 USP50Q70EL3 339 aaPredicted RBP4.76□□□□□ -1.65
CHD8-212ENST00000557329 LDLRAD3Q86YD5 345 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 ANKRD13AQ8IZ07 590 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 FBXO18Q8NFZ0 1043 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 SCAMP4Q969E2 229 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 CAVIN3Q969G5 261 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 RGMAQ96B86 450 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 C1GALT1C1Q96EU7 318 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 AIFM3Q96NN9 605 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 MAP3K14Q99558 947 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 POLR3GLQ9BT43 218 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 TTPALQ9BTX7 342 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 ZNF768Q9H5H4 540 aaKnown RBP4.76□□□□□ -1.65
CHD8-212ENST00000557329 BRD9Q9H8M2 597 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 FBXO34Q9NWN3 711 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 FEZ2Q9UHY8 353 aaPredicted RBP4.76□□□□□ -1.65
CHD8-212ENST00000557329 PCDHB1Q9Y5F3 818 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 SCN4AP35499 1836 aa4.76□□□□□ -1.65
CHD8-212ENST00000557329 CACNA1SQ13698 1873 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 A0A1W2PS29 197 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 CDHR4A6H8M9 788 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 FYB1O15117 783 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 MARCH6O60337 910 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 OFD1O75665 1012 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 RFPL1O75677 317 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 EGR2P11161 476 aaPredicted RBP4.75□□□□□ -1.65
CHD8-212ENST00000557329 HK3P52790 923 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 INHBEP58166 350 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 RPS7P62081 194 aaKnown RBP4.75□□□□□ -1.65
CHD8-212ENST00000557329 FAM189BP81408 668 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 OCA2Q04671 838 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 PIN1Q13526 163 aaPredicted RBP4.75□□□□□ -1.65
CHD8-212ENST00000557329 IL10RAQ13651 578 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 ODF1Q14990 250 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 TTF1Q15361 905 aaPredicted RBP4.75□□□□□ -1.65
CHD8-212ENST00000557329 C3orf36Q3SXR2 165 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 UTP14CQ5TAP6 766 aaKnown RBP4.75□□□□□ -1.65
CHD8-212ENST00000557329 RGMBQ6NW40 437 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 DLK2Q6UY11 383 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 NBPF5PQ86XG9 351 aaPredicted RBP4.75□□□□□ -1.65
CHD8-212ENST00000557329 NELL1Q92832 810 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 RNF31Q96EP0 1072 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 CDK5RAP3Q96JB5 506 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 TESQ9UGI8 421 aaKnown RBP4.75□□□□□ -1.65
CHD8-212ENST00000557329 ZBTB1Q9Y2K1 713 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 INSRP06213 1382 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 FLT4P35916 1363 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 COL15A1P39059 1388 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 MON2Q7Z3U7 1717 aa4.75□□□□□ -1.65
CHD8-212ENST00000557329 SOS1Q07889 1333 aaPredicted RBP4.74□□□□□ -1.65
CHD8-212ENST00000557329 MAP2P11137 1827 aaKnown RBP4.74□□□□□ -1.65
CHD8-212ENST00000557329 COL4A3Q01955 1670 aa4.74□□□□□ -1.65
CHD8-212ENST00000557329 PRAMEF33A0A0G2JMD5 474 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 207.8 ms