RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 SP3Q02447 781 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 SGCGQ13326 291 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 ACAD10Q6JQN1 1059 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 C16orf89Q6UX73 402 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 MCOLN3Q8TDD5 553 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 PLEKHA8Q96JA3 519 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 ERGIC2Q96RQ1 377 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 APBA2Q99767 749 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 CPVLQ9H3G5 476 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 RRAGCQ9HB90 399 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 EIF3LQ9Y262 564 aaKnown RBP12.44□□□□□ -0.42
NEK9-210ENST00000557026 NRCAMQ92823 1304 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 SLCO1B7G3V0H7 640 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 LARGE1O95461 756 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 SYF2O95926 243 aaKnown RBP12.44□□□□□ -0.42
NEK9-210ENST00000557026 PDGFRBP09619 1106 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 GUCY1A2P33402 732 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 CASP8Q14790 479 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 GRIK4Q16099 956 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 FBXO47Q5MNV8 452 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 PPIL6Q8IXY8 311 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 REPS1Q96D71 796 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 TARS2Q9BW92 718 aaKnown RBP12.44□□□□□ -0.42
NEK9-210ENST00000557026 RMND5AQ9H871 391 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 PDGFCQ9NRA1 345 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 H2AFY2Q9P0M6 372 aaPredicted RBP12.44□□□□□ -0.42
NEK9-210ENST00000557026 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.44□□□□□ -0.42
NEK9-210ENST00000557026 FBXL21Q9UKT6 434 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 AP3M1Q9Y2T2 418 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 KIF1AQ12756 1690 aa12.44□□□□□ -0.42
NEK9-210ENST00000557026 RPTORQ8N122 1335 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 A0A1B0GTH6 734 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 H3BMM5 538 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 MSH4O15457 936 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 ERVK-10P10266 1014 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 KLRC2P26717 231 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 PPP2R2AP63151 447 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 ZNF200P98182 395 aaPredicted RBP12.43□□□□□ -0.42
NEK9-210ENST00000557026 CACHD1Q5VU97 1274 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 MYO1HQ8N1T3 1032 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 EXD1Q8NHP7 514 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 CDCA5Q96FF9 252 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 VCPIP1Q96JH7 1222 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 KCNK16Q96T55 309 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 VAT1Q99536 393 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 WDR18Q9BV38 432 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 OSBPL8Q9BZF1 889 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 MFSD1Q9H3U5 465 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 VWDEQ8N2E2 1590 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 TRIM49BA6NDI0 452 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 KRT20P35900 424 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 GFPT1Q06210 699 aaPredicted RBP12.43□□□□□ -0.42
NEK9-210ENST00000557026 ANKS1AQ92625 1134 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 RTFDC1Q9BY42 306 aaPredicted RBP12.43□□□□□ -0.42
NEK9-210ENST00000557026 SCUBE2Q9NQ36 999 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 DDIT4Q9NX09 232 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 TTC26A0AVF1 554 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 EIF3HO15372 352 aaKnown RBP eCLIP12.43□□□□□ -0.421e-6■■■■□ 24.4
NEK9-210ENST00000557026 ITGB3P05106 788 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 PAEPP09466 180 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 EPHB2P29323 1055 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 RFX5P48382 616 aaPredicted RBP12.43□□□□□ -0.42
NEK9-210ENST00000557026 CASP10Q92851 521 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 ELMO2Q96JJ3 720 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 NR1H4Q96RI1 486 aaPredicted RBP12.43□□□□□ -0.42
NEK9-210ENST00000557026 SH3GL1Q99961 368 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 RIOX1Q9H6W3 641 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 ZMYM5Q9UJ78 669 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 ADGRG1Q9Y653 693 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 RHOBTB1O94844 696 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 PRKAA1Q13131 559 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 CCNG2Q16589 344 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 RARS2Q5T160 578 aaKnown RBP12.43□□□□□ -0.42
NEK9-210ENST00000557026 FAM117BQ6P1L5 589 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 TLK2Q86UE8 772 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 TRIML2Q8N7C3 387 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 SMARCD1Q96GM5 515 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 MTMR12Q9C0I1 747 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 AGO4Q9HCK5 861 aaKnown RBP12.43□□□□□ -0.42
NEK9-210ENST00000557026 AGPAT3Q9NRZ7 376 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 CHMP2BQ9UQN3 213 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 CRYL1Q9Y2S2 319 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 ITSN1Q15811 1721 aa12.43□□□□□ -0.42
NEK9-210ENST00000557026 CCDC189A1A4V9 331 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 IGSF6O95976 241 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 IRF1P10914 325 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 HSPA9P38646 679 aaKnown RBP12.42□□□□□ -0.42
NEK9-210ENST00000557026 FSCN1Q16658 493 aaKnown RBP12.42□□□□□ -0.42
NEK9-210ENST00000557026 FIGNQ5HY92 759 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 OVOS1Q6IE37 1185 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 NFRKBQ6P4R8 1299 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 RNF168Q8IYW5 571 aaPredicted RBP12.42□□□□□ -0.42
NEK9-210ENST00000557026 SYTL5Q8TDW5 730 aaPredicted RBP12.42□□□□□ -0.42
NEK9-210ENST00000557026 PLEKHA4Q9H4M7 779 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 RAB6BQ9NRW1 208 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.42□□□□□ -0.42
NEK9-210ENST00000557026 APPL1Q9UKG1 709 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 DEPDC5O75140 1603 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 NFASCO94856 1347 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 RBP1P09455 135 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms