RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-208	ENST00000556956	CYFIP2	Q96F07	1278 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	PBK	Q96KB5	322 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	MAGEB10	Q96LZ2	347 aa	Predicted RBP	3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	ANKRD27	Q96NW4	1050 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	ERGIC2	Q96RQ1	377 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	STRBP	Q96SI9	672 aa	Known RBP	3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	SH3GL3	Q99963	347 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	TUBGCP2	Q9BSJ2	902 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	UBAC1	Q9BSL1	405 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	IFIH1	Q9BYX4	1025 aa	Known RBP	3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	NSRP1	Q9H0G5	558 aa	Known RBP	3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	NAPB	Q9H115	298 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	ISCU	Q9H1K1	167 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	BLZF1	Q9H2G9	400 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	SEMA4A	Q9H3S1	761 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	CUEDC2	Q9H467	287 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	IPPK	Q9H8X2	491 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	MAGEF1	Q9HAY2	307 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	EPB41L5	Q9HCM4	733 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	PPAN	Q9NQ55	473 aa	Known RBP	3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	HOMER3	Q9NSC5	361 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	SPATS2L	Q9NUQ6	558 aa	Known RBP	3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	VPS54	Q9P1Q0	977 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	ARHGAP28	Q9P2N2	729 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	LRWD1	Q9UFC0	647 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	DDX20	Q9UHI6	824 aa	Known RBP	3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	PFDN2	Q9UHV9	154 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	PLAA	Q9Y263	795 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	RIPOR2	Q9Y4F9	1068 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	MARF1	Q9Y4F3	1742 aa	Known RBP	3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	NWD1	Q149M9	1564 aa		3.12	□□□□□ -1.91
SLIRP-208	ENST00000556956	LMTK3	Q96Q04	1460 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	ARHGAP23	Q9P227	1491 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	N4BP2	Q86UW6	1770 aa	Predicted RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	NFAT5	O94916	1531 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956		A0A087X0B3	334 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	CCT8L1P	A6NM43	557 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956		B4DLN1	442 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956		H0Y858	1186 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	NKRF	O15226	690 aa	Known RBP eCLIP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	ASAP2	O43150	1006 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	PPIP5K2	O43314	1243 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	B4GALT4	O60513	344 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	RTN2	O75298	545 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	RHOBTB3	O94955	611 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	HEXIM1	O94992	359 aa	Known RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	LUC7L3	O95232	432 aa	Known RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	NPTXR	O95502	500 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	ATP6V1G2	O95670	118 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	KRT14	P02533	472 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	PDHB	P11177	359 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	PC	P11498	1178 aa	Known RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	PHKG2	P15735	406 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	PAX7	P23759	505 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	CCND1	P24385	295 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	CALML3	P27482	149 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	CASP1	P29466	404 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	ADORA1	P30542	326 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	SSR1	P43307	286 aa	Known RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	CARS	P49589	748 aa	Known RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	GUCY2F	P51841	1108 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	KIF11	P52732	1056 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	SEC24C	P53992	1094 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	MLLT6	P55198	1093 aa	Predicted RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	EIF3B	P55884	814 aa	Known RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	NLRP5	P59047	1200 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	ELF3	P78545	371 aa	Predicted RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	MAP3K12	Q12852	859 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	IFIT5	Q13325	482 aa	Known RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	SLC39A6	Q13433	755 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	RBBP5	Q15291	538 aa	Known RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	E2F5	Q15329	346 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	PPP1R7	Q15435	360 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	EZH2	Q15910	746 aa	Known RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	CCDC142	Q17RM4	750 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	KIAA0753	Q2KHM9	967 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	COBLL1	Q53SF7	1204 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	RRP12	Q5JTH9	1297 aa	Known RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	HABP4	Q5JVS0	413 aa	Known RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	FAM209A	Q5JX71	171 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	METTL24	Q5JXM2	366 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	C10orf76	Q5T2E6	689 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	KLHDC7A	Q5VTJ3	777 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	YOD1	Q5VVQ6	348 aa	Predicted RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	BTBD8	Q5XKL5	378 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	AP1AR	Q63HQ0	302 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	SLFN13	Q68D06	897 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	KCTD16	Q68DU8	428 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	CNNM4	Q6P4Q7	775 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	NFRKB	Q6P4R8	1299 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	TMC5	Q6UXY8	1006 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	USP49	Q70CQ1	688 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	CXXC5	Q7LFL8	322 aa	Known RBP	3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	HOOK3	Q86VS8	718 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	EGFL6	Q8IUX8	553 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	SH2D3C	Q8N5H7	860 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	CSGALNACT2	Q8N6G5	542 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	ZSWIM2	Q8NEG5	633 aa		3.11	□□□□□ -1.91
SLIRP-208	ENST00000556956	RASSF8	Q8NHQ8	419 aa		3.11	□□□□□ -1.91

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