RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 SARM1Q6SZW1 724 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 FAM180AQ6UWF9 173 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 CATIPQ7Z7H3 387 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 GPR149Q86SP6 731 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 ZBTB46Q86UZ6 589 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 MAPKAPK5Q8IW41 473 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 LRRC8AQ8IWT6 810 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 PPM1EQ8WY54 764 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 NELL1Q92832 810 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 GTF3C6Q969F1 213 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 LRFN3Q9BTN0 628 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 FAM107BQ9H098 131 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 NUP62CLQ9H1M0 184 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 AASDHPPTQ9NRN7 309 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 DDX19AQ9NUU7 478 aaKnown RBP4.26□□□□□ -1.73
FOXN3-213ENST00000556916 KLHL11Q9NVR0 708 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 ZNF446Q9NWS9 450 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 DONSONQ9NYP3 566 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 CLIP2Q9UDT6 1046 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 IP6K2Q9UHH9 426 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 THRAP3Q9Y2W1 955 aaKnown RBP4.26□□□□□ -1.73
FOXN3-213ENST00000556916 PTPRTO14522 1441 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 CD109Q6YHK3 1445 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 PLEKHG2Q9H7P9 1386 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 SYCP2Q9BX26 1530 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 CLTCQ00610 1675 aaKnown RBP4.26□□□□□ -1.73
FOXN3-213ENST00000556916 MAST3O60307 1309 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 COL3A1P02461 1466 aaPredicted RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 CCDC196A0A1B0GTZ2 297 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 FAM171A2A8MVW0 826 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 GOLGA6L19H0YKK7 550 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 INO80B-WBP1J3KQ70 363 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 MGST3O14880 152 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 POLR3GO15318 223 aaPredicted RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 RPS6KA5O75582 802 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 SNUPNO95149 360 aaKnown RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 SNRPA1P09661 255 aaKnown RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 OAS2P29728 719 aaKnown RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 SLC6A4P31645 630 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 USP8P40818 1118 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 RECQLP46063 649 aaPredicted RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 HNRNPMP52272 730 aaKnown RBP eCLIP4.25□□□□□ -1.736e-7■■■■□ 19.7
FOXN3-213ENST00000556916 SLC16A1P53985 500 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 ELLP55199 621 aaPredicted RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 ADKP55263 362 aaKnown RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 GSDMDP57764 484 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 SATB1Q01826 763 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 DSC2Q02487 901 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 OCA2Q04671 838 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 LRMPQ12912 555 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 TRDNQ13061 729 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 ZRSR1Q15695 479 aaKnown RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 CCDC158Q5M9N0 1113 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 JAKMIP3Q5VZ66 844 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 B3GNTL1Q67FW5 361 aaPredicted RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 ZNF529Q6P280 563 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 MED25Q71SY5 747 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 CCAR2Q8N163 923 aaKnown RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 CPA6Q8N4T0 437 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 ANKRD44Q8N8A2 993 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 GPATCH11Q8N954 259 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 NEK11Q8NG66 645 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 SLC9A6Q92581 669 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 SMARCE1Q969G3 411 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 ZBTB9Q96C00 473 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 CHMP4CQ96CF2 233 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 RNF31Q96EP0 1072 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 Q96MF0 132 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 PUS7Q96PZ0 661 aaKnown RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 PLEKHF1Q96S99 279 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 DUSP26Q9BV47 211 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 ALOXE3Q9BYJ1 711 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 UBXN6Q9BZV1 441 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 INO80BQ9C086 356 aaPredicted RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 TNMDQ9H2S6 317 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 ALG13Q9NP73 1137 aaKnown RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 MED4Q9NPJ6 270 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 TMEM140Q9NV12 185 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 RBM28Q9NW13 759 aaKnown RBP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 SLC52A1Q9NWF4 448 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 NRBP1Q9UHY1 535 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 SMC3Q9UQE7 1217 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 FRMD4BQ9Y2L6 1034 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 CRYBG1Q9Y4K1 1723 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.25□□□□□ -1.73
FOXN3-213ENST00000556916 AATKQ6ZMQ8 1374 aa4.25□□□□□ -1.73
FOXN3-213ENST00000556916 SALL3Q9BXA9 1300 aa4.24□□□□□ -1.73
FOXN3-213ENST00000556916 GOLGA6L4A6NEF3 574 aa4.24□□□□□ -1.73
FOXN3-213ENST00000556916 EFCAB8A8MWE9 144 aa4.24□□□□□ -1.73
FOXN3-213ENST00000556916 FIBPO43427 364 aa4.24□□□□□ -1.73
FOXN3-213ENST00000556916 HMMRO75330 724 aa4.24□□□□□ -1.73
FOXN3-213ENST00000556916 IL33O95760 270 aa4.24□□□□□ -1.73
FOXN3-213ENST00000556916 SKILP12757 684 aa4.24□□□□□ -1.73
FOXN3-213ENST00000556916 IL2RBP14784 551 aa4.24□□□□□ -1.73
FOXN3-213ENST00000556916 ATP5JP18859 108 aa4.24□□□□□ -1.73
FOXN3-213ENST00000556916 CASTP20810 708 aaKnown RBP4.24□□□□□ -1.73
FOXN3-213ENST00000556916 TDO2P48775 406 aa4.24□□□□□ -1.73
FOXN3-213ENST00000556916 RAB27AP51159 221 aa4.24□□□□□ -1.73
FOXN3-213ENST00000556916 GSCP56915 257 aaPredicted RBP4.24□□□□□ -1.73
FOXN3-213ENST00000556916 KRTAP10-11P60412 298 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms