RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 APOBEC2Q9Y235 224 aaKnown RBP14.42□□□□□ -0.1
SHMT2-226ENST00000556825 WDR91A4D1P6 747 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 E9PMD0 336 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 M0QX08 132 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 KRT13P13646 458 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 NR4A1P22736 598 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 ALDH1A3P47895 512 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 CASP5P51878 434 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 DLG4P78352 724 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 ZNF174Q15697 407 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 ZNF746Q6NUN9 644 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-226ENST00000556825 CCBE1Q6UXH8 406 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-226ENST00000556825 AGMOQ6ZNB7 445 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 ADAT2Q7Z6V5 191 aaKnown RBP14.41□□□□□ -0.1
SHMT2-226ENST00000556825 SGMS1Q86VZ5 419 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 GALNT6Q8NCL4 622 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 GSTCDQ8NEC7 633 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 FBXO27Q8NI29 283 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 SLC26A7Q8TE54 656 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 MAML1Q92585 1016 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 JADE3Q92613 823 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 ATP2A3Q93084 1043 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 C18orf8Q96DM3 657 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 TMEM87BQ96K49 555 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 DCUN1D5Q9BTE7 237 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 RUBCNLQ9H714 662 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 AAASQ9NRG9 546 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 EBF1Q9UH73 591 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 AXIN2Q9Y2T1 843 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 A0A0A6YYK5 440 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-226ENST00000556825 B8ZZF3 427 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 GRM8O00222 908 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 FCHO1O14526 889 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 DDX3YO15523 660 aaKnown RBP14.41□□□□□ -0.1
SHMT2-226ENST00000556825 ALOX5P09917 674 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 PRKACAP17612 351 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 ATICP31939 592 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 EIF4A1P60842 406 aaKnown RBP14.41□□□□□ -0.1
SHMT2-226ENST00000556825 GK3PQ14409 553 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 OASLQ15646 514 aaKnown RBP14.41□□□□□ -0.1
SHMT2-226ENST00000556825 STK11Q15831 433 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 SLC15A2Q16348 729 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 XKR5Q6UX68 686 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 RNF19BQ6ZMZ0 732 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 TAS2R42Q7RTR8 314 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 Q8N9G6 341 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-226ENST00000556825 MINDY2Q8NBR6 621 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 C12orf43Q96C57 262 aaKnown RBP14.41□□□□□ -0.1
SHMT2-226ENST00000556825 RBM15Q96T37 977 aaKnown RBP eCLIP14.41□□□□□ -0.1
SHMT2-226ENST00000556825 GMIPQ9P107 970 aa14.41□□□□□ -0.1
SHMT2-226ENST00000556825 NOL4O94818 638 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 POLR2MP0CAP2 368 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 ZNF200P98182 395 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-226ENST00000556825 C19orf57Q0VDD7 668 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 PTGDRQ13258 359 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 DLGAP5Q15398 846 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 NPTX1Q15818 432 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 KLHL38Q2WGJ6 581 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 DCAF12L1Q5VU92 463 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 GPR141Q7Z602 305 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 RALGPS2Q86X27 583 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-226ENST00000556825 BRSK2Q8IWQ3 736 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 KIAA2013Q8IYS2 634 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 KCTD17Q8N5Z5 321 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 FLAD1Q8NFF5 587 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 OSBP2Q969R2 916 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 CSRNP1Q96S65 589 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 CCDC77Q9BR77 488 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 MYL10Q9BUA6 226 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 MKNK1Q9BUB5 465 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 RSPH9Q9H1X1 276 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-226ENST00000556825 IL20Q9NYY1 176 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 PI4KBQ9UBF8 816 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 DAPK2Q9UIK4 370 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 PCDHA12Q9UN75 941 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 CPQQ9Y646 472 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 ATP8B3O60423 1300 aa14.4□□□□□ -0.1
SHMT2-226ENST00000556825 J3QRK9 145 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 IRS4O14654 1257 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-226ENST00000556825 CYP26A1O43174 497 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 FGFR1P11362 822 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 HSPA6P17066 643 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 BMPR1AP36894 532 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 PEX3P56589 373 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 CCNIQ14094 377 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 ASIC2Q16515 512 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 DGKDQ16760 1214 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 SMU1Q2TAY7 513 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 BBS9Q3SYG4 887 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 NDUFAF5Q5TEU4 345 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 ZNF530Q6P9A1 599 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-226ENST00000556825 GALNT7Q86SF2 657 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 TRABD2AQ86V40 505 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 ELMOD2Q8IZ81 293 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 IGDCC4Q8TDY8 1250 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 FBXL8Q96CD0 374 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 FAM20AQ96MK3 541 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 TMEM120AQ9BXJ8 343 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 C1orf21Q9H246 121 aa14.39□□□□□ -0.11
SHMT2-226ENST00000556825 KCNK13Q9HB14 408 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms