RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 SAFBQ15424 915 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCFD1-221ENST00000556534 TEDDM1Q5T9Z0 273 aa5.62□□□□□ -1.51
SCFD1-221ENST00000556534 KAZNQ674X7 775 aa5.62□□□□□ -1.51
SCFD1-221ENST00000556534 DTX2Q86UW9 622 aa5.62□□□□□ -1.51
SCFD1-221ENST00000556534 SIMC1Q8NDZ2 872 aa5.62□□□□□ -1.51
SCFD1-221ENST00000556534 PJA1Q8NG27 643 aa5.62□□□□□ -1.51
SCFD1-221ENST00000556534 BPIFB1Q8TDL5 484 aa5.62□□□□□ -1.51
SCFD1-221ENST00000556534 DKK3Q9UBP4 350 aa5.62□□□□□ -1.51
SCFD1-221ENST00000556534 CORO2BQ9UQ03 480 aa5.62□□□□□ -1.51
SCFD1-221ENST00000556534 LINC00473A8K010 186 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 URI1O94763 535 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-221ENST00000556534 ERBB2P04626 1255 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 PIK3CBP42338 1070 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 RARRES1P49788 294 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 PDE6CP51160 858 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 CLCN2P51788 898 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 ATXN1P54253 815 aaKnown RBP5.61□□□□□ -1.51
SCFD1-221ENST00000556534 SATB1Q01826 763 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 E2F2Q14209 437 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 TBCCQ15814 346 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 CCAR1Q8IX12 1150 aaKnown RBP5.61□□□□□ -1.51
SCFD1-221ENST00000556534 SLC15A3Q8IY34 581 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 ATRIPQ8WXE1 791 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 PPP1R9BQ96SB3 815 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 UNKQ9C0B0 810 aaKnown RBP5.61□□□□□ -1.51
SCFD1-221ENST00000556534 ARNT2Q9HBZ2 717 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 XPNPEP3Q9NQH7 507 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 EHD3Q9NZN3 535 aa5.61□□□□□ -1.51
SCFD1-221ENST00000556534 CCDC151A5D8V7 595 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 RHPN2P1A8MT19 583 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 FOXN3O00409 490 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-221ENST00000556534 SLC16A3O15427 465 aaKnown RBP5.6□□□□□ -1.51
SCFD1-221ENST00000556534 CCP110O43303 1012 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 TLR5O60602 858 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 CAND2O75155 1236 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 TXNP10599 105 aaKnown RBP5.6□□□□□ -1.51
SCFD1-221ENST00000556534 PHKG2P15735 406 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 ADORA2AP29274 412 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 CASP5P51878 434 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 ZNF618Q5T7W0 954 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 CCSAPQ6IQ19 270 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-221ENST00000556534 KSR2Q6VAB6 950 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 STK31Q9BXU1 1019 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 CHST8Q9H2A9 424 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 DNMT3BQ9UBC3 853 aaKnown RBP5.6□□□□□ -1.51
SCFD1-221ENST00000556534 SNX13Q9Y5W8 968 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 CDY1Q9Y6F8 540 aa5.6□□□□□ -1.51
SCFD1-221ENST00000556534 LOC102723971A0A1B0GUV8 181 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 ANO9A1A5B4 782 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 H7C4K7 107 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 KIAA0355O15063 1070 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 KPNA5O15131 536 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 NXPH3O95157 252 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 IL6RP08887 468 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-221ENST00000556534 NR2F6P10588 404 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 TSHRP16473 764 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 ZFXP17010 805 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-221ENST00000556534 ACVR2AP27037 513 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 LIPAP38571 399 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 CARSP49589 748 aaKnown RBP5.59□□□□□ -1.51
SCFD1-221ENST00000556534 ZNF543Q08ER8 600 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 DAG1Q14118 895 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 PTCHD3Q3KNS1 767 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 DEPDC1Q5TB30 811 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 FCRL6Q6DN72 434 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 GLG1Q92896 1179 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 STRBPQ96SI9 672 aaKnown RBP5.59□□□□□ -1.51
SCFD1-221ENST00000556534 BRIP1Q9BX63 1249 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 KRTAP9-8Q9BYQ0 159 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 DHX36Q9H2U1 1008 aaKnown RBP5.59□□□□□ -1.51
SCFD1-221ENST00000556534 SLITRK6Q9H5Y7 841 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 PNPLA8Q9NP80 782 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 MID2Q9UJV3 735 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 TLK1Q9UKI8 766 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 SNX14Q9Y5W7 946 aa5.59□□□□□ -1.51
SCFD1-221ENST00000556534 RRP9O43818 475 aaKnown RBP5.58□□□□□ -1.52
SCFD1-221ENST00000556534 RASSF9O75901 435 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 MT-ND5P03915 603 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 KRT18P05783 430 aaKnown RBP5.58□□□□□ -1.52
SCFD1-221ENST00000556534 MYL1P05976 194 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 JUPP14923 745 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 PRIM2P49643 509 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 CACNA2D1P54289 1103 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 PRKAG1P54619 331 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 INHBEP58166 350 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 BMPR2Q13873 1038 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 NPY5RQ15761 445 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 INSCQ1MX18 579 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 ERCC6LQ2NKX8 1250 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 ZNF362Q5T0B9 420 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-221ENST00000556534 UNC13DQ70J99 1090 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 KCTD20Q7Z5Y7 419 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 ABRAQ8N0Z2 381 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 TMEM171Q8WVE6 324 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 SNX22Q96L94 193 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 DUSP26Q9BV47 211 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 NAA15Q9BXJ9 866 aaKnown RBP5.58□□□□□ -1.52
SCFD1-221ENST00000556534 GLOD4Q9HC38 313 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 ZSCAN32Q9NX65 697 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 HDAC9Q9UKV0 1011 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms