RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 DMWDQ09019 674 aa24.16■■□□□ 1.46
ACTN1-220ENST00000556433 PKP1Q13835 747 aa24.16■■□□□ 1.46
ACTN1-220ENST00000556433 LPAL2Q16609 132 aa24.16■■□□□ 1.46
ACTN1-220ENST00000556433 VSTM1Q6UX27 236 aa24.16■■□□□ 1.46
ACTN1-220ENST00000556433 CEP57L1Q8IYX8 460 aa24.16■■□□□ 1.46
ACTN1-220ENST00000556433 TTC16Q8NEE8 873 aa24.16■■□□□ 1.46
ACTN1-220ENST00000556433 RIN3Q8TB24 985 aa24.16■■□□□ 1.46
ACTN1-220ENST00000556433 MRPL45Q9BRJ2 306 aaKnown RBP24.16■■□□□ 1.46
ACTN1-220ENST00000556433 C2orf42Q9NWW7 574 aa24.16■■□□□ 1.46
ACTN1-220ENST00000556433 CGNQ9P2M7 1197 aaKnown RBP24.16■■□□□ 1.46
ACTN1-220ENST00000556433 GMEB2Q9UKD1 530 aa24.16■■□□□ 1.46
ACTN1-220ENST00000556433 RCOR1Q9UKL0 485 aa24.16■■□□□ 1.46
ACTN1-220ENST00000556433 TRAV19A0A0A6YYK7 116 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 OTOL1A6NHN0 477 aaPredicted RBP24.15■■□□□ 1.46
ACTN1-220ENST00000556433 K7ESF4 209 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 USP17L7P0C7H9 530 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 ARSAP15289 507 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 AMPD2Q01433 879 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 FAM160A1Q05DH4 1040 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 PDGFRLQ15198 375 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 KNOP1Q1ED39 458 aaKnown RBP24.15■■□□□ 1.46
ACTN1-220ENST00000556433 BMT2Q1RMZ1 405 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 PRR23BQ6ZRT6 265 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 GRAMD1CQ8IYS0 662 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 FSIP1Q8NA03 581 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 OR6B3Q8NGW1 331 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 ZNF516Q92618 1163 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 SPATA17Q96L03 361 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 SLC22A12Q96S37 553 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 SERTAD1Q9UHV2 236 aa24.15■■□□□ 1.46
ACTN1-220ENST00000556433 EXOC3O60645 756 aa24.14■■□□□ 1.45
ACTN1-220ENST00000556433 CKMP06732 381 aa24.14■■□□□ 1.45
ACTN1-220ENST00000556433 FAM163BP0C2L3 166 aa24.14■■□□□ 1.45
ACTN1-220ENST00000556433 TNNC1P63316 161 aa24.14■■□□□ 1.45
ACTN1-220ENST00000556433 GRSF1Q12849 480 aaKnown RBP eCLIP24.14■■□□□ 1.45
ACTN1-220ENST00000556433 TRPC3Q13507 836 aa24.14■■□□□ 1.45
ACTN1-220ENST00000556433 PUM1Q14671 1186 aaKnown RBP eCLIP24.14■■□□□ 1.455e-6■■■□□ 17
ACTN1-220ENST00000556433 MTF1Q14872 753 aa24.14■■□□□ 1.45
ACTN1-220ENST00000556433 WDR72Q3MJ13 1102 aa24.14■■□□□ 1.45
ACTN1-220ENST00000556433 TMEM196Q5HYL7 178 aa24.14■■□□□ 1.45
ACTN1-220ENST00000556433 HEATR6Q6AI08 1181 aaKnown RBP24.14■■□□□ 1.45
ACTN1-220ENST00000556433 C12orf56Q8IXR9 622 aa24.14■■□□□ 1.45
ACTN1-220ENST00000556433 ARL14EPQ8N8R7 260 aaPredicted RBP24.14■■□□□ 1.45
ACTN1-220ENST00000556433 MYCBPAPQ8TBZ2 947 aa24.14■■□□□ 1.45
ACTN1-220ENST00000556433 PCED1BQ96HM7 432 aa24.14■■□□□ 1.45
ACTN1-220ENST00000556433 DENND4CQ5VZ89 1909 aa24.14■■□□□ 1.45
ACTN1-220ENST00000556433 TRDMT1O14717 391 aaKnown RBP24.13■■□□□ 1.45
ACTN1-220ENST00000556433 HRO43593 1189 aa24.13■■□□□ 1.45
ACTN1-220ENST00000556433 TACC1O75410 805 aa24.13■■□□□ 1.45
ACTN1-220ENST00000556433 HDCP19113 662 aa24.13■■□□□ 1.45
ACTN1-220ENST00000556433 ANXA13P27216 316 aa24.13■■□□□ 1.45
ACTN1-220ENST00000556433 SIM2Q14190 667 aaPredicted RBP24.13■■□□□ 1.45
ACTN1-220ENST00000556433 RSPO4Q2I0M5 234 aaPredicted RBP24.13■■□□□ 1.45
ACTN1-220ENST00000556433 MDH1BQ5I0G3 518 aa24.13■■□□□ 1.45
ACTN1-220ENST00000556433 FSTL4Q6MZW2 842 aa24.13■■□□□ 1.45
ACTN1-220ENST00000556433 DGLUCYQ7Z3D6 616 aa24.13■■□□□ 1.45
ACTN1-220ENST00000556433 LONP2Q86WA8 852 aa24.13■■□□□ 1.45
ACTN1-220ENST00000556433 GZF1Q9H116 711 aaPredicted RBP24.13■■□□□ 1.45
ACTN1-220ENST00000556433 DUS2Q9NX74 493 aaKnown RBP24.13■■□□□ 1.45
ACTN1-220ENST00000556433 GCNT4Q9P109 453 aa24.13■■□□□ 1.45
ACTN1-220ENST00000556433 ZNF638Q14966 1978 aaKnown RBP24.12■■□□□ 1.45
ACTN1-220ENST00000556433 C2orf78A6NCI8 922 aa24.12■■□□□ 1.45
ACTN1-220ENST00000556433 PHACTR2O75167 634 aa24.12■■□□□ 1.45
ACTN1-220ENST00000556433 SLFN14P0C7P3 912 aa24.12■■□□□ 1.45
ACTN1-220ENST00000556433 CNR2P34972 360 aa24.12■■□□□ 1.45
ACTN1-220ENST00000556433 MYL6P60660 151 aa24.12■■□□□ 1.45
ACTN1-220ENST00000556433 ZNF77Q15935 545 aa24.12■■□□□ 1.45
ACTN1-220ENST00000556433 DENND5BQ6ZUT9 1274 aa24.12■■□□□ 1.45
ACTN1-220ENST00000556433 CHFRQ96EP1 664 aa24.12■■□□□ 1.45
ACTN1-220ENST00000556433 CEP295NLQ96MC4 621 aa24.12■■□□□ 1.45
ACTN1-220ENST00000556433 DLL3Q9NYJ7 618 aa24.12■■□□□ 1.45
ACTN1-220ENST00000556433 NXF1Q9UBU9 619 aaKnown RBP24.12■■□□□ 1.45
ACTN1-220ENST00000556433 USP18Q9UMW8 372 aa24.12■■□□□ 1.45
ACTN1-220ENST00000556433 NME7Q9Y5B8 376 aa24.12■■□□□ 1.45
ACTN1-220ENST00000556433 CEP250Q9BV73 2442 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 TRIM66O15016 1216 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 PTPN1P18031 435 aaKnown RBP24.11■■□□□ 1.45
ACTN1-220ENST00000556433 HOXC13P31276 330 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 ATICP31939 592 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 IFNAR2P48551 515 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 GALK1P51570 392 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 USP46P62068 366 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 SRSF5Q13243 272 aaKnown RBP24.11■■□□□ 1.45
ACTN1-220ENST00000556433 KCNB1Q14721 858 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 LAIR1Q6GTX8 287 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 CPA6Q8N4T0 437 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 GOLGA5Q8TBA6 731 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 SH3RF2Q8TEC5 729 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 OSCP1Q8WVF1 389 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 PAGE5Q96GU1 130 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 ECT2Q9H8V3 914 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 FBRSL1Q9HCM7 1045 aaKnown RBP24.11■■□□□ 1.45
ACTN1-220ENST00000556433 EHD2Q9NZN4 543 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 TRPM5Q9NZQ8 1165 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 WNT6Q9Y6F9 365 aa24.11■■□□□ 1.45
ACTN1-220ENST00000556433 KIF26AQ9ULI4 1882 aaPredicted RBP24.11■■□□□ 1.45
ACTN1-220ENST00000556433 A8MXQ7 604 aa24.1■■□□□ 1.45
ACTN1-220ENST00000556433 KLRC4O43908 158 aa24.1■■□□□ 1.45
ACTN1-220ENST00000556433 STAU1O95793 577 aaKnown RBP24.1■■□□□ 1.45
ACTN1-220ENST00000556433 TGM1P22735 817 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms