RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 CSGALNACT2Q8N6G5 542 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 STKLD1Q8NE28 680 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 FAM3CQ92520 227 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 HPS3Q969F9 1004 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 E2F7Q96AV8 911 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 CLDN23Q96B33 292 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 DHX58Q96C10 678 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 RSPRY1Q96DX4 576 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 ZFYVE19Q96K21 471 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 ZNF396Q96N95 335 aaPredicted RBP7.2□□□□□ -1.26
PSEN1-216ENST00000556066 STRA6Q9BX79 667 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 SMG9Q9H0W8 520 aaKnown RBP7.2□□□□□ -1.26
PSEN1-216ENST00000556066 LMAN1LQ9HAT1 526 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 TRPV4Q9HBA0 871 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 PDE11AQ9HCR9 933 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 IGSF5Q9NSI5 407 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 FBXO4Q9UKT5 387 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 MAGED2Q9UNF1 606 aaPredicted RBP7.2□□□□□ -1.26
PSEN1-216ENST00000556066 R3HCC1Q9Y3T6 440 aaKnown RBP7.2□□□□□ -1.26
PSEN1-216ENST00000556066 ANAPC1Q9H1A4 1944 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 MYH10P35580 1976 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 SDK1Q7Z5N4 2213 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 GREB1Q4ZG55 1949 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 FRMD3A2A2Y4 597 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 SHISA7A6NL88 538 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 CHADO15335 359 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 PRPF40AO75400 957 aaKnown RBP7.19□□□□□ -1.26
PSEN1-216ENST00000556066 FBXO45P0C2W1 286 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 HAPLN1P10915 354 aaPredicted RBP7.19□□□□□ -1.26
PSEN1-216ENST00000556066 SNRPBP14678 240 aaKnown RBP7.19□□□□□ -1.26
PSEN1-216ENST00000556066 GARTP22102 1010 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 ACAT1P24752 427 aaKnown RBP7.19□□□□□ -1.26
PSEN1-216ENST00000556066 CDC25CP30307 473 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 RPS9P46781 194 aaKnown RBP7.19□□□□□ -1.26
PSEN1-216ENST00000556066 NASPP49321 788 aaPredicted RBP7.19□□□□□ -1.26
PSEN1-216ENST00000556066 GPR15P49685 360 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 ASIC1P78348 528 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 MYL7Q01449 175 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 POU5F1Q01860 360 aaKnown RBP7.19□□□□□ -1.26
PSEN1-216ENST00000556066 SMARCB1Q12824 385 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 NR1H3Q13133 447 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 FZD5Q13467 585 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 ZNF528Q3MIS6 628 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 SDHAF4Q5VUM1 108 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 SCARA3Q6AZY7 606 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 STXBP4Q6ZWJ1 553 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 DGLUCYQ7Z3D6 616 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 GPD1LQ8N335 351 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 PDCL2Q8N4E4 241 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 DCLK2Q8N568 766 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 C1orf127Q8N9H9 656 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 LINC00301Q8NCQ3 95 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 GLIS3Q8NEA6 775 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 TTC16Q8NEE8 873 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 SPPL2BQ8TCT7 592 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 C2orf15Q8WU43 125 aaKnown RBP7.19□□□□□ -1.26
PSEN1-216ENST00000556066 ZNF592Q92610 1267 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 RUBCNQ92622 972 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 BORCS6Q96GS4 357 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 ANKRD36BP1Q96IX9 119 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 PI4K2AQ9BTU6 479 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 MKNK1Q9BUB5 465 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 MTMR12Q9C0I1 747 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 LRRC27Q9C0I9 530 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 TNMDQ9H2S6 317 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 TASP1Q9H6P5 420 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 TMEM206Q9H813 350 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 TRPV5Q9NQA5 729 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 RBM12Q9NTZ6 932 aaKnown RBP7.19□□□□□ -1.26
PSEN1-216ENST00000556066 TMLHEQ9NVH6 421 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 DDX43Q9NXZ2 648 aaKnown RBP7.19□□□□□ -1.26
PSEN1-216ENST00000556066 GTSE1Q9NYZ3 720 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 NCDNQ9UBB6 729 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 HSFX1Q9UBD0 423 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 ITGA11Q9UKX5 1188 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 L1RE1Q9UN81 338 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 PCDHB5Q9Y5E4 795 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 PCDHGA2Q9Y5H1 932 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 SNX9Q9Y5X1 595 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 FAM208BQ5VWN6 2430 aa7.19□□□□□ -1.26
PSEN1-216ENST00000556066 SPAG17Q6Q759 2223 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 ZNF233A6NK53 670 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 SPECC1L-ADORA2AF8WAN1 911 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 ARNTLO00327 626 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 POLR2DO15514 142 aaKnown RBP7.18□□□□□ -1.26
PSEN1-216ENST00000556066 CUTAO60888 179 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 PPP6R2O75170 966 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 PRAMEF12O95522 483 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 TNNC2P02585 160 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 CYP2F1P24903 491 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 AVPR1AP37288 418 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 NLRP12P59046 1061 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 RBP5P82980 135 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 AMPD3Q01432 767 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 PTK2Q05397 1052 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 TNK2Q07912 1038 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 FCHO2Q0JRZ9 810 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 MYO1EQ12965 1108 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 PPP2R5DQ14738 602 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 NFE2Q16621 373 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms