RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 TMC2Q8TDI7 906 aa20.77■□□□□ 0.92
CBLN3-202ENST00000555436 USP13Q92995 863 aaPredicted RBP20.77■□□□□ 0.92
CBLN3-202ENST00000555436 KIF9Q9HAQ2 790 aa20.77■□□□□ 0.92
CBLN3-202ENST00000555436 TDP1Q9NUW8 608 aa20.77■□□□□ 0.92
CBLN3-202ENST00000555436 CCL26Q9Y258 94 aa20.77■□□□□ 0.92
CBLN3-202ENST00000555436 FRMD4BQ9Y2L6 1034 aa20.77■□□□□ 0.92
CBLN3-202ENST00000555436 R4GN57 208 aa20.77■□□□□ 0.92
CBLN3-202ENST00000555436 VPS13AQ96RL7 3174 aa20.77■□□□□ 0.92
CBLN3-202ENST00000555436 CACNA1IQ9P0X4 2223 aa20.76■□□□□ 0.91
CBLN3-202ENST00000555436 VNN1O95497 513 aa20.76■□□□□ 0.91
CBLN3-202ENST00000555436 PTPN1P18031 435 aaKnown RBP20.76■□□□□ 0.91
CBLN3-202ENST00000555436 GRIK1P39086 918 aa20.76■□□□□ 0.91
CBLN3-202ENST00000555436 SOX9P48436 509 aa20.76■□□□□ 0.91
CBLN3-202ENST00000555436 DLG4P78352 724 aa20.76■□□□□ 0.91
CBLN3-202ENST00000555436 NFIL3Q16649 462 aa20.76■□□□□ 0.91
CBLN3-202ENST00000555436 CEP135Q66GS9 1140 aa20.76■□□□□ 0.91
CBLN3-202ENST00000555436 RALGPS2Q86X27 583 aaPredicted RBP20.76■□□□□ 0.91
CBLN3-202ENST00000555436 IER2Q9BTL4 223 aa20.76■□□□□ 0.91
CBLN3-202ENST00000555436 CHRDQ9H2X0 955 aa20.76■□□□□ 0.91
CBLN3-202ENST00000555436 GTSE1Q9NYZ3 720 aa20.76■□□□□ 0.91
CBLN3-202ENST00000555436 MIA3Q5JRA6 1907 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 PTPRZ1P23471 2315 aaPredicted RBP20.75■□□□□ 0.91
CBLN3-202ENST00000555436 A8MXQ7 604 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 SPECC1L-ADORA2AF8WAN1 911 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 IKBKBO14920 756 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 MAPK13O15264 365 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 CTHP32929 405 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 NUCB2P80303 420 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 MTAPQ13126 283 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 ZNF268Q14587 947 aaPredicted RBP20.75■□□□□ 0.91
CBLN3-202ENST00000555436 ZACNQ401N2 412 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 ZNF667Q5HYK9 610 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 MAMSTRQ6ZN01 415 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 GUF1Q8N442 669 aaKnown RBP20.75■□□□□ 0.91
CBLN3-202ENST00000555436 CCDC34Q96HJ3 373 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 DPEP3Q9H4B8 488 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 SMYD3Q9H7B4 428 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 LMAN1LQ9HAT1 526 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 MAPK8IP1Q9UQF2 711 aa20.75■□□□□ 0.91
CBLN3-202ENST00000555436 TRIM66O15016 1216 aa20.74■□□□□ 0.91
CBLN3-202ENST00000555436 CHRNB1P11230 501 aa20.74■□□□□ 0.91
CBLN3-202ENST00000555436 NR2F2P24468 414 aa20.74■□□□□ 0.91
CBLN3-202ENST00000555436 ANXA13P27216 316 aa20.74■□□□□ 0.91
CBLN3-202ENST00000555436 CSTF1Q05048 431 aaKnown RBP20.74■□□□□ 0.91
CBLN3-202ENST00000555436 TNK2Q07912 1038 aa20.74■□□□□ 0.91
CBLN3-202ENST00000555436 DENND5BQ6ZUT9 1274 aa20.74■□□□□ 0.91
CBLN3-202ENST00000555436 B3GALNT2Q8NCR0 500 aa20.74■□□□□ 0.91
CBLN3-202ENST00000555436 TTC8Q8TAM2 541 aa20.74■□□□□ 0.91
CBLN3-202ENST00000555436 NUP210Q8TEM1 1887 aaPredicted RBP20.74■□□□□ 0.91
CBLN3-202ENST00000555436 C8orf48Q96LL4 319 aa20.74■□□□□ 0.91
CBLN3-202ENST00000555436 FAM83CQ9BQN1 747 aa20.74■□□□□ 0.91
CBLN3-202ENST00000555436 ELOVL4Q9GZR5 314 aa20.74■□□□□ 0.91
CBLN3-202ENST00000555436 PRMT8Q9NR22 394 aaPredicted RBP20.74■□□□□ 0.91
CBLN3-202ENST00000555436 GKN1Q9NS71 199 aa20.74■□□□□ 0.91
CBLN3-202ENST00000555436 TICRRQ7Z2Z1 1910 aa20.73■□□□□ 0.91
CBLN3-202ENST00000555436 F8VP50 259 aa20.73■□□□□ 0.91
CBLN3-202ENST00000555436 CLSTN1O94985 981 aa20.73■□□□□ 0.91
CBLN3-202ENST00000555436 LMNAP02545 664 aaKnown RBP20.73■□□□□ 0.91
CBLN3-202ENST00000555436 CDH8P55286 799 aa20.73■□□□□ 0.91
CBLN3-202ENST00000555436 SGSM1Q2NKQ1 1148 aa20.73■□□□□ 0.91
CBLN3-202ENST00000555436 ITPRIPL2Q3MIP1 535 aa20.73■□□□□ 0.91
CBLN3-202ENST00000555436 C1orf220Q5T0J3 134 aa20.73■□□□□ 0.91
CBLN3-202ENST00000555436 TXNDC11Q6PKC3 985 aa20.73■□□□□ 0.91
CBLN3-202ENST00000555436 SV2AQ7L0J3 742 aa20.73■□□□□ 0.91
CBLN3-202ENST00000555436 FMR1NBQ8N0W7 255 aaPredicted RBP20.73■□□□□ 0.91
CBLN3-202ENST00000555436 TTLL2Q9BWV7 592 aa20.73■□□□□ 0.91
CBLN3-202ENST00000555436 TRPC7Q9HCX4 862 aa20.73■□□□□ 0.91
CBLN3-202ENST00000555436 EHD2Q9NZN4 543 aa20.73■□□□□ 0.91
CBLN3-202ENST00000555436 FAM186AA6NE01 2351 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 TRAV19A0A0A6YYK7 116 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 AKAP3O75969 853 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 USP17L7P0C7H9 530 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 P4HA1P13674 534 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 RPL13P26373 211 aaKnown RBP20.72■□□□□ 0.91
CBLN3-202ENST00000555436 VAMP7P51809 220 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 USP46P62068 366 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 NOP14P78316 857 aaKnown RBP20.72■□□□□ 0.91
CBLN3-202ENST00000555436 FAM160A1Q05DH4 1040 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 LRRC32Q14392 662 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 CC2D1AQ6P1N0 951 aaPredicted RBP20.72■□□□□ 0.91
CBLN3-202ENST00000555436 INTS8Q75QN2 995 aaKnown RBP20.72■□□□□ 0.91
CBLN3-202ENST00000555436 RIN3Q8TB24 985 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 TAF4BQ92750 862 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 NELL1Q92832 810 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 ELMO3Q96BJ8 720 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 SLC22A12Q96S37 553 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 CYP2S1Q96SQ9 504 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 B3GNT5Q9BYG0 378 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 ZNF518BQ9C0D4 1074 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 GCNT4Q9P109 453 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 PCDHGA2Q9Y5H1 932 aa20.72■□□□□ 0.91
CBLN3-202ENST00000555436 C2orf78A6NCI8 922 aa20.71■□□□□ 0.91
CBLN3-202ENST00000555436 GOLGA6L4A6NEF3 574 aa20.71■□□□□ 0.91
CBLN3-202ENST00000555436 CKMP06732 381 aa20.71■□□□□ 0.91
CBLN3-202ENST00000555436 RAP1GAPP47736 663 aa20.71■□□□□ 0.91
CBLN3-202ENST00000555436 CACNA2D1P54289 1103 aa20.71■□□□□ 0.91
CBLN3-202ENST00000555436 ENPEPQ07075 957 aa20.71■□□□□ 0.91
CBLN3-202ENST00000555436 ZCWPW2Q504Y3 356 aa20.71■□□□□ 0.91
CBLN3-202ENST00000555436 SCARA5Q6ZMJ2 495 aa20.71■□□□□ 0.91
CBLN3-202ENST00000555436 ADSSL1Q8N142 457 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms