RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 TBCCQ15814 346 aa11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 KLHL38Q2WGJ6 581 aa11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 P3H1Q32P28 736 aa11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 ZACNQ401N2 412 aa11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 TBC1D10BQ4KMP7 808 aaPredicted RBP11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 NBPF12Q5TAG4 269 aaPredicted RBP11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 CYP4F22Q6NT55 531 aa11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 TRMT1LQ7Z2T5 733 aaKnown RBP11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 APOBEC3FQ8IUX4 373 aaKnown RBP11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 PIP4K2CQ8TBX8 421 aa11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 SPATA16Q9BXB7 569 aa11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 ZWILCHQ9H900 591 aa11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 MRPL47Q9HD33 250 aaKnown RBP11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 HOXC10Q9NYD6 342 aa11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 ATXN10Q9UBB4 475 aa11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 PARP14Q460N5 1801 aa11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 ARID2Q68CP9 1835 aa11.21□□□□□ -0.61
MTHFD1-210ENST00000555252 POC1B-GALNT4F8VUJ3 575 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 RGS20O76081 388 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 ATG7O95352 703 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 ZBTB7AO95365 584 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 C4BPAP04003 597 aaKnown RBP11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 CYP1A1P04798 512 aaPredicted RBP11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 LYNP07948 512 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 ESRRAP11474 423 aaPredicted RBP11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 TBXAS1P24557 533 aaPredicted RBP11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 NSFP46459 744 aaKnown RBP11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 SERPINB4P48594 390 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 CDK7P50613 346 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 CLCN2P51788 898 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 SESN3P58005 492 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 XIAPP98170 497 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 DSG1Q02413 1049 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 ADCY1Q08828 1119 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 EMC2Q15006 297 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 EAPPQ56P03 285 aaPredicted RBP11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 ADGRD1Q6QNK2 874 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 CATSPERGQ6ZRH7 1159 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 TAS1R3Q7RTX0 852 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 CPNE8Q86YQ8 564 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 TMPRSS6Q8IU80 811 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 CCDC60Q8IWA6 550 aaPredicted RBP11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 MICALL2Q8IY33 904 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 ZNF276Q8N554 614 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 DNERQ8NFT8 737 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 CCDC110Q8TBZ0 833 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 PPP2R3CQ969Q6 453 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 DHRS4Q9BTZ2 278 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 PPP1R12CQ9BZL4 782 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 EPB41L1Q9H4G0 881 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 MANSC1Q9H8J5 431 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 ACP6Q9NPH0 428 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 KRT82Q9NSB4 513 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 PCMTD2Q9NV79 361 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 ARL8BQ9NVJ2 186 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 ZDHHC7Q9NXF8 308 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 TAS2R1Q9NYW7 299 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 KANSL3Q9P2N6 904 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 HEY2Q9UBP5 337 aa11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 AGO2Q9UKV8 859 aaKnown RBP11.21□□□□□ -0.62
MTHFD1-210ENST00000555252 PHIPQ8WWQ0 1821 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 KLF11O14901 512 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 FKBP6O75344 327 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 CSDE1O75534 798 aaKnown RBP11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 UPP2O95045 317 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 HLA-DRAP01903 254 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 RALAP11233 206 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 TNNI1P19237 187 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 PIK3CAP42336 1068 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 GMPSP49915 693 aaPredicted RBP11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 AP3M2P53677 418 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 AP2B1P63010 937 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 MCL1Q07820 350 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 HNRNPDQ14103 355 aaKnown RBP11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 TMEM132BQ14DG7 1078 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 STXBP2Q15833 593 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 WDR72Q3MJ13 1102 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 DNAL1Q4LDG9 190 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 PLEKHG4Q58EX7 1191 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 AAGABQ6PD74 315 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 GSTA5Q7RTV2 222 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 PHLDB2Q86SQ0 1253 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 ST13P4Q8IZP2 240 aaPredicted RBP11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 C4orf33Q8N1A6 199 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 NME8Q8N427 588 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 PDCD7Q8N8D1 485 aaKnown RBP11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 PHC3Q8NDX5 983 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 CHST13Q8NET6 341 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 DEPTORQ8TB45 409 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 ZNF516Q92618 1163 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 WNK4Q96J92 1243 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 TSSK1BQ9BXA7 367 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 PORCNQ9H237 461 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 TMEM134Q9H6X4 195 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 PHF24Q9UPV7 400 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 R3HDM2Q9Y2K5 976 aaKnown RBP11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 PPME1Q9Y570 386 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 MAFBQ9Y5Q3 323 aaPredicted RBP11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 SCINQ9Y6U3 715 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms