RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PSMC6P62333 389 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 PURAQ00577 322 aaKnown RBP4.77□□□□□ -1.65
VTI1B-203ENST00000554636 ARHGAP1Q07960 439 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 USP10Q14694 798 aaKnown RBP4.77□□□□□ -1.65
VTI1B-203ENST00000554636 NOLC1Q14978 699 aaKnown RBP eCLIP4.77□□□□□ -1.65
VTI1B-203ENST00000554636 ADCK5Q3MIX3 580 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 TMEM177Q53S58 311 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 CASC1Q6TDU7 716 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 DBX2Q6ZNG2 339 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 TMTC3Q6ZXV5 915 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 NOL8Q76FK4 1167 aaKnown RBP4.77□□□□□ -1.65
VTI1B-203ENST00000554636 OTOP2Q7RTS6 562 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 CATIPQ7Z7H3 387 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 HOMER1Q86YM7 354 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 PALM2Q8IXS6 379 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 SRBD1Q8N5C6 995 aaKnown RBP4.77□□□□□ -1.65
VTI1B-203ENST00000554636 WDR48Q8TAF3 677 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 NSUN6Q8TEA1 469 aaKnown RBP4.77□□□□□ -1.65
VTI1B-203ENST00000554636 SCFD2Q8WU76 684 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 ASB15Q8WXK1 588 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 AJUBAQ96IF1 538 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 CCDC136Q96JN2 1154 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 TCEANC2Q96MN5 208 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 CLUHP3Q96NS8 147 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 SAMD11Q96NU1 681 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 IWS1Q96ST2 819 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 RMDN3Q96TC7 470 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 MPHOSPH6Q99547 160 aaKnown RBP4.77□□□□□ -1.65
VTI1B-203ENST00000554636 LBHD1Q9BQE6 289 aaPredicted RBP4.77□□□□□ -1.65
VTI1B-203ENST00000554636 PDCD2LQ9BRP1 358 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 SPZ1Q9BXG8 430 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 KRTAP4-2Q9BYR5 136 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 LRRC2Q9BYS8 371 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 MEGF9Q9H1U4 602 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 TRIM39Q9HCM9 518 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 TET1Q8NFU7 2136 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 UMODL1Q5DID0 1318 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 COL6A3P12111 3177 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 MYH7BA7E2Y1 1941 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 CCDC69A6NI79 296 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 B4DLN1 442 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 GCOM1H8Y6P7 765 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-203ENST00000554636 HIP1RO75146 1068 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 CFBP00751 764 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 TIMP1P01033 207 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 MMP3P08254 477 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 MYL3P08590 195 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 POLR2MP0CAP2 368 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 SMARCA1P28370 1054 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 HOXA13P31271 388 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-203ENST00000554636 KIF5BP33176 963 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 HSPA4P34932 840 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 CPT1AP50416 773 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 MRPL12P52815 198 aaKnown RBP4.76□□□□□ -1.65
VTI1B-203ENST00000554636 CD83Q01151 205 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 EXOSC10Q01780 885 aaKnown RBP4.76□□□□□ -1.65
VTI1B-203ENST00000554636 FPGSQ05932 587 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 SQSTM1Q13501 440 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 ITGA7Q13683 1181 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 SCN5AQ14524 2016 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 ZNF460Q14592 562 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 PGM5Q15124 567 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 SHHQ15465 462 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 ZXDCQ2QGD7 858 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-203ENST00000554636 ARHGEF16Q5VV41 709 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 MFSD5Q6N075 450 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 SEPT14Q6ZU15 432 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 MICU3Q86XE3 530 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 TMTC2Q8N394 836 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 SAMD3Q8N6K7 520 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 CTCFLQ8NI51 663 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-203ENST00000554636 AFG1LQ8WV93 481 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 PIBF1Q8WXW3 757 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 NEK1Q96PY6 1258 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 LMF1Q96S06 567 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 LZTS2Q9BRK4 669 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 MTG1Q9BT17 334 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-203ENST00000554636 KRTAP3-1Q9BYR8 98 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 WNT8AQ9H1J5 351 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 DOCK5Q9H7D0 1870 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 KCNH7Q9NS40 1196 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 TRMT13Q9NUP7 481 aaKnown RBP4.76□□□□□ -1.65
VTI1B-203ENST00000554636 GALNT8Q9NY28 637 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 MAP3K20Q9NYL2 800 aaKnown RBP4.76□□□□□ -1.65
VTI1B-203ENST00000554636 SAMD15Q9P1V8 674 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 PCDHA1Q9Y5I3 950 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 TRIP12Q14669 1992 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-203ENST00000554636 NID2Q14112 1375 aa4.76□□□□□ -1.65
VTI1B-203ENST00000554636 MYO9BQ13459 2157 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 CDH23Q9H251 3354 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 CCDC163A0A0D9SF12 145 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 MEIS2O14770 477 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 PPP1R12AO14974 1030 aaPredicted RBP4.75□□□□□ -1.65
VTI1B-203ENST00000554636 OPA1O60313 960 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 EIF3JO75822 258 aaKnown RBP4.75□□□□□ -1.65
VTI1B-203ENST00000554636 MPIG6BO95866 241 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 F2P00734 622 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 GH1P01241 217 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 CALM1P0DP23 149 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms