RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CAPS2Q9BXY5 557 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 GLIS2Q9BZE0 524 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 TSGA10Q9BZW7 698 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 CCDC68Q9H2F9 335 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 SLC6A15Q9H2J7 730 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 ZSCAN16Q9H4T2 348 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 SPC25Q9HBM1 224 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 ZNF304Q9HCX3 659 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 UBAP1Q9NZ09 502 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 IP6K2Q9UHH9 426 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 NARFQ9UHQ1 456 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 LCMT1Q9UIC8 334 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 DENND2AQ9ULE3 1009 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 SLC45A1Q9Y2W3 748 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 TTLL3Q9Y4R7 772 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 SQORQ9Y6N5 450 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 MRC1P22897 1456 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 LAMB1P07942 1786 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 POLR2AP24928 1970 aaKnown RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 BRCA2P51587 3418 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 UBE2QL1A1L167 161 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 ERVV-2B6SEH9 535 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 P4HA2O15460 535 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 FAM20BO75063 409 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 TBCAO75347 108 aaKnown RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 RPSAP08865 295 aaKnown RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 ZFXP17010 805 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 IBSPP21815 317 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 PSMA3P25788 255 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 CA8P35219 290 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 GCKP35557 465 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 ACTN2P35609 894 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 IARSP41252 1262 aaKnown RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 EPS15P42566 896 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 CCT8P50990 548 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 BPIFB4P59827 614 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 CTAG1AP78358 180 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 SLC6A3Q01959 620 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 KIF23Q02241 960 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 NCBP1Q09161 790 aaKnown RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 TCIRG1Q13488 830 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 DHX8Q14562 1220 aaKnown RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 ELAVL1Q15717 326 aaKnown RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 LONRF1Q17RB8 773 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 Q4G0T1 1027 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 LRRC23Q53EV4 343 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 BOLA3Q53S33 107 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 PRR5LQ6MZQ0 368 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 LRRC31Q6UY01 552 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 BRAPQ7Z569 592 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 ARHGAP22Q7Z5H3 698 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 RPAP2Q8IXW5 612 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 C2orf69Q8N8R5 385 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 OR5AN1Q8NGI8 311 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 BICD2Q8TD16 824 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 ZFPM2Q8WW38 1151 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 LZICQ8WZA0 190 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 GCDHQ92947 438 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 ERP27Q96DN0 273 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 IL17RAQ96F46 866 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 CRAMP1Q96RY5 1269 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 OSBPL9Q96SU4 736 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 XPO4Q9C0E2 1151 aaKnown RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 SIRPGQ9P1W8 387 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 SAE1Q9UBE0 346 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 HDAC9Q9UKV0 1011 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 SSX2IPQ9Y2D8 614 aa4.84□□□□□ -1.63
ATXN3-227ENST00000554491 LUC7L2Q9Y383 392 aaKnown RBP4.84□□□□□ -1.63
ATXN3-227ENST00000554491 RANBP2P49792 3224 aaKnown RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 EME2A4GXA9 379 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 TMEM221A6NGB7 291 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 CHUKO15111 745 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 TTI1O43156 1089 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 H2AFYO75367 372 aaKnown RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 ZNF189O75820 626 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 KRT37O76014 449 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 FGFR1OPO95684 399 aaKnown RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 PEX11BO96011 259 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 FOSP01100 380 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 FESP07332 822 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 SRGNP10124 158 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 RBP3P10745 1247 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 IDO1P14902 403 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 RRM1P23921 792 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 TCF7P36402 384 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 MATR3P43243 847 aaKnown RBP eCLIP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 RANBP1P43487 201 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 GCLCP48506 637 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 MAN2A2P49641 1150 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 NUCB1Q02818 461 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 SERINC3Q13530 473 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 SLMAPQ14BN4 828 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 PPP2R5BQ15173 497 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 NFE2L2Q16236 605 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 CDCA2Q69YH5 1023 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 RGMBQ6NW40 437 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 ZCCHC8Q6NZY4 707 aaKnown RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 CPLX2Q6PUV4 134 aaKnown RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 FAM111BQ6SJ93 734 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 OLFML1Q6UWY5 402 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms