RNA–Protein interactions for RNA: ENST00000554456.1

PSMA3-206, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-206ENST00000554456 KRBA2Q6ZNG9 492 aa16.3■□□□□ 0.2
PSMA3-206ENST00000554456 CELF5Q8N6W0 485 aaKnown RBP16.3■□□□□ 0.2
PSMA3-206ENST00000554456 USP13Q92995 863 aaPredicted RBP16.3■□□□□ 0.2
PSMA3-206ENST00000554456 SYAP1Q96A49 352 aaPredicted RBP16.3■□□□□ 0.2
PSMA3-206ENST00000554456 TRMT2BQ96GJ1 504 aaKnown RBP16.3■□□□□ 0.2
PSMA3-206ENST00000554456 UXTQ9UBK9 157 aaPredicted RBP16.3■□□□□ 0.2
PSMA3-206ENST00000554456 PDXKO00764 312 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 TACC1O75410 805 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 VNN1O95497 513 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 DDX6P26196 483 aaKnown RBP eCLIP16.29■□□□□ 0.2
PSMA3-206ENST00000554456 WEE1P30291 646 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 CTHP32929 405 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 GRIK1P39086 918 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 CACNA2D1P54289 1103 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 CDH8P55286 799 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 NCOA4Q13772 614 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 MAPRE1Q15691 268 aaKnown RBP16.29■□□□□ 0.2
PSMA3-206ENST00000554456 WDR44Q5JSH3 913 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 TRIM68Q6AZZ1 485 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 ZC3H14Q6PJT7 736 aaKnown RBP16.29■□□□□ 0.2
PSMA3-206ENST00000554456 MON1AQ86VX9 555 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 SLC9A9Q8IVB4 645 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 ADSSL1Q8N142 457 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 MYCBPAPQ8TBZ2 947 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 CCDC47Q96A33 483 aaKnown RBP16.29■□□□□ 0.2
PSMA3-206ENST00000554456 MYRFLQ96LU7 910 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 SLC22A12Q96S37 553 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 CHRDQ9H2X0 955 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 LMAN1LQ9HAT1 526 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 RBM12Q9NTZ6 932 aaKnown RBP16.29■□□□□ 0.2
PSMA3-206ENST00000554456 TDP1Q9NUW8 608 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 FBXO4Q9UKT5 387 aa16.29■□□□□ 0.2
PSMA3-206ENST00000554456 A8MXQ7 604 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 RHOBTB3O94955 611 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 ZNF202O95125 648 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 STAU1O95793 577 aaKnown RBP16.28■□□□□ 0.2
PSMA3-206ENST00000554456 CKMP06732 381 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 ANXA13P27216 316 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 ATICP31939 592 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 USP46P62068 366 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 BECN1Q14457 450 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 PON2Q15165 354 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 VSTM1Q6UX27 236 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 B3GALNT2Q8NCR0 500 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 ZNF518BQ9C0D4 1074 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 SDCBP2Q9H190 292 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 C8orf33Q9H7E9 229 aaPredicted RBP16.28■□□□□ 0.2
PSMA3-206ENST00000554456 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.28■□□□□ 0.2
PSMA3-206ENST00000554456 PRMT8Q9NR22 394 aaPredicted RBP16.28■□□□□ 0.2
PSMA3-206ENST00000554456 GKN1Q9NS71 199 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 TMEM30AQ9NV96 361 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 ZMYM5Q9UJ78 669 aa16.28■□□□□ 0.2
PSMA3-206ENST00000554456 MYH10P35580 1976 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 MYO16Q9Y6X6 1858 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 PTPRZ1P23471 2315 aaPredicted RBP16.27■□□□□ 0.2
PSMA3-206ENST00000554456 C2orf78A6NCI8 922 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 F8VP50 259 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 CLDN5O00501 218 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 CALUO43852 315 aaPredicted RBP16.27■□□□□ 0.2
PSMA3-206ENST00000554456 LMNAP02545 664 aaKnown RBP16.27■□□□□ 0.2
PSMA3-206ENST00000554456 C4BPAP04003 597 aaKnown RBP16.27■□□□□ 0.2
PSMA3-206ENST00000554456 CHRNB1P11230 501 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 PTPN1P18031 435 aaKnown RBP16.27■□□□□ 0.2
PSMA3-206ENST00000554456 NR2F2P24468 414 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 CLDN10P78369 228 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 PLCB2Q00722 1185 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 ZNF667Q5HYK9 610 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 Q6ZS52 159 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 SMYD4Q8IYR2 804 aaPredicted RBP16.27■□□□□ 0.2
PSMA3-206ENST00000554456 MSANTD3Q96H12 275 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 SPATA17Q96L03 361 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 CYP2S1Q96SQ9 504 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 EBF3Q9H4W6 596 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 KIF9Q9HAQ2 790 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 HPS4Q9NQG7 708 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 THG1LQ9NWX6 298 aaKnown RBP16.27■□□□□ 0.2
PSMA3-206ENST00000554456 FRMD4BQ9Y2L6 1034 aa16.27■□□□□ 0.2
PSMA3-206ENST00000554456 EP300Q09472 2414 aaPredicted RBP16.27■□□□□ 0.19
PSMA3-206ENST00000554456 TRAV19A0A0A6YYK7 116 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 TRIM66O15016 1216 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 TRIM49P0CI25 452 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 TRIM49CP0CI26 452 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 ARSAP15289 507 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 PIK3CAP42336 1068 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 AP3M2P53677 418 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 MLLT6P55198 1093 aaPredicted RBP16.26■□□□□ 0.19
PSMA3-206ENST00000554456 IFRD2Q12894 506 aaPredicted RBP16.26■□□□□ 0.19
PSMA3-206ENST00000554456 ORC1Q13415 861 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 GAS6Q14393 721 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 ITPRIPL2Q3MIP1 535 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 ZNF528Q3MIS6 628 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 ZACNQ401N2 412 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 C1orf220Q5T0J3 134 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 SPOPLQ6IQ16 392 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 DENND5BQ6ZUT9 1274 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 RALGPS2Q86X27 583 aaPredicted RBP16.26■□□□□ 0.19
PSMA3-206ENST00000554456 ARL14EPQ8N8R7 260 aaPredicted RBP16.26■□□□□ 0.19
PSMA3-206ENST00000554456 TMEM174Q8WUU8 243 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 FAM83CQ9BQN1 747 aa16.26■□□□□ 0.19
PSMA3-206ENST00000554456 B3GNT5Q9BYG0 378 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms