RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 DAG1Q14118 895 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 TBCCQ15814 346 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 INSCQ1MX18 579 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 NBPF8Q3BBV2 869 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 KIAA0895LQ68EN5 471 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 IL31Q6EBC2 164 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 UNC13DQ70J99 1090 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 SLC15A3Q8IY34 581 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 BPIFB1Q8TDL5 484 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 SLC9A6Q92581 669 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 PPP2R3CQ969Q6 453 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 CHFRQ96EP1 664 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 CHST8Q9H2A9 424 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 IKZF4Q9H2S9 585 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 SERHLQ9NQF3 203 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 XPNPEP3Q9NQH7 507 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 WDR33Q9C0J8 1336 aaKnown RBP6.15□□□□□ -1.43
SCFD1-211ENST00000554437 VWC2LB2RUY7 222 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 ADM5C9JUS6 153 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 PLIN1O60240 522 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 PARP1P09874 1014 aaKnown RBP6.14□□□□□ -1.43
SCFD1-211ENST00000554437 TXNP10599 105 aaKnown RBP6.14□□□□□ -1.43
SCFD1-211ENST00000554437 KCNA3P22001 575 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 CXCR5P32302 372 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 CARSP49589 748 aaKnown RBP6.14□□□□□ -1.43
SCFD1-211ENST00000554437 PRIM2P49643 509 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 SP2Q02086 613 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 ZNF543Q08ER8 600 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 SLC29A2Q14542 456 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 TXNRD1Q16881 649 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 YAF2Q8IY57 180 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 GPR150Q8NGU9 434 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 PARD3BQ8TEW8 1205 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 IPCEF1Q8WWN9 437 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-211ENST00000554437 SNX22Q96L94 193 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 ALG8Q9BVK2 526 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 BRIP1Q9BX63 1249 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 EHD3Q9NZN3 535 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 MID2Q9UJV3 735 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 DMRT1Q9Y5R6 373 aa6.14□□□□□ -1.43
SCFD1-211ENST00000554437 POM121BA6NF01 834 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 H7C4K7 107 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 RAB27BO00194 218 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 ORC4O43929 436 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 TLR5O60602 858 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 RASAL1O95294 804 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 MT-ND5P03915 603 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 IL1R1P14778 569 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 PROZP22891 400 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 PDE6CP51160 858 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 CASP5P51878 434 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 NEK3P51956 506 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 HMGA2P52926 109 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 ZNF169Q14929 603 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-211ENST00000554437 ERCC6LQ2NKX8 1250 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 TEDDM1Q5T9Z0 273 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 DEPDC1Q5TB30 811 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 CACHD1Q5VU97 1274 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 PEG10Q86TG7 708 aaKnown RBP6.13□□□□□ -1.43
SCFD1-211ENST00000554437 DTX2Q86UW9 622 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 LIX1LQ8IVB5 337 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 SPARTQ8N0X7 666 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 CCDC33Q8N5R6 958 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 ATRIPQ8WXE1 791 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 ATG4AQ8WYN0 398 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 TBC1D23Q9NUY8 699 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 DKK3Q9UBP4 350 aa6.13□□□□□ -1.43
SCFD1-211ENST00000554437 ARID4BQ4LE39 1312 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-211ENST00000554437 WDR27A2RRH5 827 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 CCDC151A5D8V7 595 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 SLC16A3O15427 465 aaKnown RBP6.12□□□□□ -1.43
SCFD1-211ENST00000554437 CCP110O43303 1012 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 RGS10O43665 173 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 CSF1RP07333 972 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 ANXA2P07355 339 aaKnown RBP6.12□□□□□ -1.43
SCFD1-211ENST00000554437 NR2F6P10588 404 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 ZFXP17010 805 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-211ENST00000554437 ACVR2AP27037 513 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 ADORA2AP29274 412 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 GRIA3P42263 894 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 STT3AP46977 705 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 PTDSS1P48651 473 aaKnown RBP6.12□□□□□ -1.43
SCFD1-211ENST00000554437 ITGA8P53708 1063 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 MAPK10P53779 464 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 ARHGEF7Q14155 803 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 LONRF1Q17RB8 773 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 ZNF618Q5T7W0 954 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 KLHDC7AQ5VTJ3 777 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 RNF44Q7L0R7 432 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 MAVSQ7Z434 540 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 KCTD20Q7Z5Y7 419 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 SDR16C5Q8N3Y7 309 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 SMCR8Q8TEV9 937 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-211ENST00000554437 TMEM171Q8WVE6 324 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 OSCP1Q8WVF1 389 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 PBKQ96KB5 322 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 GLOD4Q9HC38 313 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 GBA2Q9HCG7 927 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-211ENST00000554437 FOXJ2Q9P0K8 574 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 ZNF212Q9UDV6 495 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms