RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 NT5C1BQ96P26 610 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 CDK15Q96Q40 435 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 POP1Q99575 1024 aaKnown RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 DHRS4Q9BTZ2 278 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 OSBPL7Q9BZF2 842 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 UPF3BQ9BZI7 483 aaKnown RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 TRIM5Q9C035 493 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 MTMR12Q9C0I1 747 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 SYNCQ9H7C4 482 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 SUGCTQ9HAC7 445 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 TRMT13Q9NUP7 481 aaKnown RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 NDFIP2Q9NV92 336 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 TBC1D29Q9UFV1 150 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 CENPFP49454 3210 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 SPTBN5Q9NRC6 3674 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 A0A1W2PPH5 198 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SYCE3A1L190 88 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TTLL8A6PVC2 850 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 DDX11L8A8MPP1 907 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 LOC730098B7Z3J9 87 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CAPN9O14815 690 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 HYAL3O43820 417 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SMPD2O60906 423 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 GJB6O95452 261 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 AMHP03971 560 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ATP4AP20648 1035 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CASTP20810 708 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 MSNP26038 577 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SLC16A2P36021 539 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 USP8P40818 1118 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 GATA4P43694 442 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ASMTP46597 345 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CDR1P51861 262 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 PMS1P54277 932 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CCL23P55773 120 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CENPCQ03188 943 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 MGAT3Q09327 533 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 KIF5AQ12840 1032 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 LAMB3Q13751 1172 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 BYSLQ13895 437 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 EFR3AQ14156 821 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 IKBKEQ14164 716 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SPARCL1Q14515 664 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 GBX1Q14549 363 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SART3Q15020 963 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CLUL1Q15846 466 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 PTGISQ16647 500 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TCTN1Q2MV58 587 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 GDF6Q6KF10 455 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SLC30A6Q6NXT4 461 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ELMSAN1Q6PJG2 1045 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CORO6Q6QEF8 472 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SLC30A10Q6XR72 485 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RNF207Q6ZRF8 634 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 STOX1Q6ZVD7 989 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RUFY3Q7L099 469 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ERMP1Q7Z2K6 904 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 PPFIBP1Q86W92 1011 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 OSTM1Q86WC4 334 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ZBTB44Q8NCP5 570 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ST13P5Q8NFI4 369 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 OR52K2Q8NGK3 314 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 MOSPD2Q8NHP6 518 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RFWD2Q8NHY2 731 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CCHCR1Q8TD31 782 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SYTL5Q8TDW5 730 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ACMSDQ8TDX5 336 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TOP1MTQ969P6 601 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RRP36Q96EU6 259 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SCLYQ96I15 445 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SHDQ96IW2 340 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SPATA17Q96L03 361 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CMTM3Q96MX0 182 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 YME1L1Q96TA2 773 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TMEM47Q9BQJ4 181 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 NSUN3Q9H649 340 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 EHMT1Q9H9B1 1298 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TRPV4Q9HBA0 871 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 XAB2Q9HCS7 855 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SEPT11Q9NVA2 429 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 MALT1Q9UDY8 824 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 EXOC7Q9UPT5 735 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 DNM3Q9UQ16 869 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 DOCK5Q9H7D0 1870 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 FANCMQ8IYD8 2048 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TRANK1O15050 2925 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 E2F8A0AVK6 867 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 KRT87PA6NCN2 255 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SGK1O00141 431 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 NFIBO00712 420 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 MCF2LO15068 1137 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 GPR39O43194 453 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 DCXO43602 365 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 KDM1AO60341 852 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 BAG2O95816 211 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 MMP1P03956 469 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ATP5BP06576 529 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 POU2F2P09086 479 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CKMT1AP12532 417 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RARGP13631 454 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms