RNA–Protein interactions for RNA: ENST00000554357.5

TRIP11-202, Transcript of thyroid hormone receptor interactor 11, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIP11, Length 5,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP11-202ENST00000554357 VCPKMTQ9H867 229 aa3.35□□□□□ -1.87
TRIP11-202ENST00000554357 PRKRIP1Q9H875 184 aaPredicted RBP3.35□□□□□ -1.87
TRIP11-202ENST00000554357 CNOT10Q9H9A5 744 aaKnown RBP3.35□□□□□ -1.87
TRIP11-202ENST00000554357 MRPL40Q9NQ50 206 aaKnown RBP3.35□□□□□ -1.87
TRIP11-202ENST00000554357 HEYLQ9NQ87 328 aaPredicted RBP3.35□□□□□ -1.87
TRIP11-202ENST00000554357 RDH8Q9NYR8 311 aa3.35□□□□□ -1.87
TRIP11-202ENST00000554357 SH3BP4Q9P0V3 963 aa3.35□□□□□ -1.87
TRIP11-202ENST00000554357 TRHDEQ9UKU6 1024 aa3.35□□□□□ -1.87
TRIP11-202ENST00000554357 PNMA8BQ9ULN7 279 aaPredicted RBP3.35□□□□□ -1.87
TRIP11-202ENST00000554357 TNFSF13BQ9Y275 285 aa3.35□□□□□ -1.87
TRIP11-202ENST00000554357 GIT1Q9Y2X7 761 aa3.35□□□□□ -1.87
TRIP11-202ENST00000554357 EMILIN1Q9Y6C2 1016 aa3.35□□□□□ -1.87
TRIP11-202ENST00000554357 CHL1O00533 1208 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 VWA5AO00534 786 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 TBX3O15119 743 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 CAPN5O15484 640 aaPredicted RBP3.34□□□□□ -1.87
TRIP11-202ENST00000554357 SOAT2O75908 522 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 NEBLO76041 1014 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 P04436 131 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 ITGAVP06756 1048 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 CYP3A5P20815 502 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 PSMA3P25788 255 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 CASP1P29466 404 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 ECE1P42892 770 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 POLD2P49005 469 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 NPEPPSP55786 919 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 EIF3BP55884 814 aaKnown RBP3.34□□□□□ -1.87
TRIP11-202ENST00000554357 PPP2CAP67775 309 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 FPGSQ05932 587 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 TRIM28Q13263 835 aaKnown RBP3.34□□□□□ -1.87
TRIP11-202ENST00000554357 SLC39A14Q15043 492 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 ZNF827Q17R98 1081 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 LONRF2Q1L5Z9 754 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 C14orf28Q4W4Y0 310 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 PI16Q6UXB8 463 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 SYT13Q7L8C5 426 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 ACOT4Q8N9L9 421 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 POMGNT2Q8NAT1 580 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 ZNF397Q8NF99 534 aaPredicted RBP3.34□□□□□ -1.87
TRIP11-202ENST00000554357 OR6B3Q8NGW1 331 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 PXYLP1Q8TE99 480 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 CHTF18Q8WVB6 975 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 RAD54LQ92698 747 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 ATP2A3Q93084 1043 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 MTERF3Q96E29 417 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 SAAL1Q96ER3 474 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 MAP6Q96JE9 813 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 DMRTA2Q96SC8 542 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 ELAC2Q9BQ52 826 aaKnown RBP3.34□□□□□ -1.87
TRIP11-202ENST00000554357 CINPQ9BW66 212 aaPredicted RBP3.34□□□□□ -1.87
TRIP11-202ENST00000554357 PIGUQ9H490 435 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 BCAS3Q9H6U6 928 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 NOD2Q9HC29 1040 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 KRT82Q9NSB4 513 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 TBC1D22BQ9NU19 505 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 PKD2L2Q9NZM6 624 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 ERVK-18Q9QC07 812 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 FTSJ1Q9UET6 329 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 CDH22Q9UJ99 828 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 RIMKLBQ9ULI2 386 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 STRIP2Q9ULQ0 834 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 TMCC3Q9ULS5 477 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 GMEB1Q9Y692 573 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 SBNO2Q9Y2G9 1366 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 KANSL1LA0AUZ9 987 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 KIF28PB7ZC32 967 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 KERAO60938 352 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 ZMPSTE24O75844 475 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 GCNT3O95395 438 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 RAB3DO95716 219 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 CRTAMO95727 393 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 KLRC2P26717 231 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 CHRNA5P30532 468 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 MAP2K2P36507 400 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 SCTRP47872 440 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 COPAP53621 1224 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 EPHB3P54753 998 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 BIDP55957 195 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 AP1S1P61966 158 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 PDE1BQ01064 536 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 ZNF844Q08AG5 666 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 WHAMMP3Q1A5X7 153 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 HSP90B2PQ58FF3 399 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 SAMD4BQ5PRF9 694 aaKnown RBP3.34□□□□□ -1.87
TRIP11-202ENST00000554357 GPATCH4Q5T3I0 446 aaKnown RBP3.34□□□□□ -1.87
TRIP11-202ENST00000554357 TMTC3Q6ZXV5 915 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 ACOT1Q86TX2 421 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 VSIG1Q86XK7 387 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 PRSS58Q8IYP2 241 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 PSD4Q8NDX1 1056 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 OR4D6Q8NGJ1 314 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 ZNF514Q96K75 400 aaPredicted RBP3.34□□□□□ -1.87
TRIP11-202ENST00000554357 INSM2Q96T92 566 aaPredicted RBP3.34□□□□□ -1.87
TRIP11-202ENST00000554357 TUBB6Q9BUF5 446 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 CCDC28BQ9BUN5 200 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 NUCKS1Q9H1E3 243 aaKnown RBP3.34□□□□□ -1.87
TRIP11-202ENST00000554357 UPF3AQ9H1J1 476 aaKnown RBP3.34□□□□□ -1.87
TRIP11-202ENST00000554357 RNF41Q9H4P4 317 aaPredicted RBP3.34□□□□□ -1.87
TRIP11-202ENST00000554357 MEAF6Q9HAF1 191 aa3.34□□□□□ -1.87
TRIP11-202ENST00000554357 TRMT13Q9NUP7 481 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms