RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 RHOP08100 348 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 TGM1P22735 817 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 WARSP23381 471 aaKnown RBP13.71□□□□□ -0.21
XRCC3-206ENST00000554170 GNL1P36915 607 aaPredicted RBP13.71□□□□□ -0.21
XRCC3-206ENST00000554170 CETN1Q12798 172 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 MTAPQ13126 283 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 PLD1Q13393 1074 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 NFE2Q16621 373 aaPredicted RBP13.71□□□□□ -0.21
XRCC3-206ENST00000554170 DPCR1Q3MIW9 517 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 WDR44Q5JSH3 913 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 RBM43Q6ZSC3 357 aaKnown RBP13.71□□□□□ -0.21
XRCC3-206ENST00000554170 LIMS2Q7Z4I7 341 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 CREBRFQ8IUR6 639 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 ELMOD1Q8N336 334 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 FBXL13Q8NEE6 735 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 OR6B3Q8NGW1 331 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 SPPL2BQ8TCT7 592 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 TAS1R2Q8TE23 839 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 DNASE1L2Q92874 299 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 MCRS1Q96EZ8 462 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 TMEM209Q96SK2 561 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 CDH9Q9ULB4 789 aa13.71□□□□□ -0.21
XRCC3-206ENST00000554170 USP24Q9UPU5 2620 aa13.71□□□□□ -0.22
XRCC3-206ENST00000554170 SCN1AP35498 2009 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 TSC2P49815 1807 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 MTMR11A4FU01 709 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 SEC24AO95486 1093 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 ASS1P00966 412 aaKnown RBP13.7□□□□□ -0.22
XRCC3-206ENST00000554170 TRIM21P19474 475 aaKnown RBP13.7□□□□□ -0.22
XRCC3-206ENST00000554170 ACAT1P24752 427 aaKnown RBP13.7□□□□□ -0.22
XRCC3-206ENST00000554170 ALDH1A3P47895 512 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 TUFMP49411 452 aaKnown RBP13.7□□□□□ -0.22
XRCC3-206ENST00000554170 DUSP4Q13115 394 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 INTS6LQ5JSJ4 861 aaKnown RBP13.7□□□□□ -0.22
XRCC3-206ENST00000554170 POTEHQ6S545 545 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 OSTM1Q86WC4 334 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 FAM114A1Q8IWE2 563 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 ZNF687Q8N1G0 1237 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 SLC35C1Q96A29 364 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 ELSPBP1Q96BH3 223 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 RTKNQ9BST9 563 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 DNAI2Q9GZS0 605 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 ANO10Q9NW15 660 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 RAB20Q9NX57 234 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 HSFX1Q9UBD0 423 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 GMEB2Q9UKD1 530 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 USP18Q9UMW8 372 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 PCDHB5Q9Y5E4 795 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 INSL5Q9Y5Q6 135 aa13.7□□□□□ -0.22
XRCC3-206ENST00000554170 A8MXQ7 604 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 PDGFRBP09619 1106 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 TDGF1P13385 188 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 CEBPBP17676 345 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 FCARP24071 287 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 MARSP56192 900 aaKnown RBP13.69□□□□□ -0.22
XRCC3-206ENST00000554170 NOP14P78316 857 aaKnown RBP13.69□□□□□ -0.22
XRCC3-206ENST00000554170 TWF1Q12792 350 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 MAPRE1Q15691 268 aaKnown RBP13.69□□□□□ -0.22
XRCC3-206ENST00000554170 MGAT5BQ3V5L5 792 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 TANGO2Q6ICL3 276 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 IQCEQ6IPM2 695 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 CAVIN1Q6NZI2 390 aaKnown RBP13.69□□□□□ -0.22
XRCC3-206ENST00000554170 SCARA5Q6ZMJ2 495 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 LRRTM3Q86VH5 581 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 ATAD1Q8NBU5 361 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 KBTBD7Q8WVZ9 684 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 ZNF512Q96ME7 567 aaPredicted RBP13.69□□□□□ -0.22
XRCC3-206ENST00000554170 SYT15Q9BQS2 421 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 MRPL45Q9BRJ2 306 aaKnown RBP13.69□□□□□ -0.22
XRCC3-206ENST00000554170 PI4K2AQ9BTU6 479 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 CHRDQ9H2X0 955 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 PARD6AQ9NPB6 346 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 ABI2Q9NYB9 513 aaPredicted RBP13.69□□□□□ -0.22
XRCC3-206ENST00000554170 MAGEC2Q9UBF1 373 aaPredicted RBP13.69□□□□□ -0.22
XRCC3-206ENST00000554170 SLC27A5Q9Y2P5 690 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.69□□□□□ -0.22
XRCC3-206ENST00000554170 CACNA1GO43497 2377 aa13.69□□□□□ -0.22
XRCC3-206ENST00000554170 DCDC2BA2VCK2 349 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 MAN2B1O00754 1011 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 P4HA2O15460 535 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 LETM1O95202 739 aaPredicted RBP13.68□□□□□ -0.22
XRCC3-206ENST00000554170 AFPP02771 609 aaKnown RBP13.68□□□□□ -0.22
XRCC3-206ENST00000554170 PTPN2P17706 415 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 LMO2P25791 158 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 FMO5P49326 533 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 EPHB3P54753 998 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 NRLP54845 237 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 CDH8P55286 799 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 STX1AQ16623 288 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 KLHL40Q2TBA0 621 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 CBWD6Q4V339 395 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 CBWD3Q5JTY5 395 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 PRSS36Q5K4E3 855 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 CBWD5Q5RIA9 395 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 SPOPLQ6IQ16 392 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 MAMSTRQ6ZN01 415 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 C4orf50Q6ZRC1 276 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 SPATA2LQ8IUW3 424 aaPredicted RBP13.68□□□□□ -0.22
XRCC3-206ENST00000554170 TRIM59Q8IWR1 403 aa13.68□□□□□ -0.22
XRCC3-206ENST00000554170 FAXDC2Q96IV6 333 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms