RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 RAD23BP54727 409 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 IGBP1P78318 339 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 MYO1EQ12965 1108 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 ZNF268Q14587 947 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-211ENST00000553882 HADHQ16836 314 aaKnown RBP15.28■□□□□ 0.04
ACTN1-211ENST00000553882 CCDC142Q17RM4 750 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 ZNF667Q5HYK9 610 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 SH3PXD2AQ5TCZ1 1133 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 RNF43Q68DV7 783 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 RFX6Q8HWS3 928 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 FBXO36Q8NEA4 188 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 LRRC8CQ8TDW0 803 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 AGAP11Q8TF27 550 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 STAMBPL1Q96FJ0 436 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 MYLK2Q9H1R3 596 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 ETNK1Q9HBU6 452 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 UBN1Q9NPG3 1134 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 POLR2AP24928 1970 aaKnown RBP15.28■□□□□ 0.04
ACTN1-211ENST00000553882 ITGB3P05106 788 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 MIPP30301 263 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 BAG6P46379 1132 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 GEMIN4P57678 1058 aaKnown RBP15.28■□□□□ 0.04
ACTN1-211ENST00000553882 MMRN1Q13201 1228 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 RAB6CQ53S08 254 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 HHATQ5VTY9 493 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 LVRNQ6Q4G3 990 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 TSHZ1Q6ZSZ6 1077 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 XYLT1Q86Y38 959 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 FBXO16Q8IX29 292 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-211ENST00000553882 PPIL6Q8IXY8 311 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 C1orf127Q8N9H9 656 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 FAM167AQ96KS9 214 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 SPATA33Q96N06 139 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 TMEM237Q96Q45 408 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 NCAPGQ9BPX3 1015 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 RAB6CQ9H0N0 254 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 RABGEF1Q9UJ41 708 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 EVPLQ92817 2033 aa15.27■□□□□ 0.04
ACTN1-211ENST00000553882 ACKR2O00590 384 aa15.27■□□□□ 0.04
ACTN1-211ENST00000553882 RPSAP08865 295 aaKnown RBP15.27■□□□□ 0.04
ACTN1-211ENST00000553882 TGFB3P10600 412 aa15.27■□□□□ 0.04
ACTN1-211ENST00000553882 ARL4CP56559 192 aa15.27■□□□□ 0.04
ACTN1-211ENST00000553882 SURF1Q15526 300 aa15.27■□□□□ 0.04
ACTN1-211ENST00000553882 WDR78Q5VTH9 848 aa15.27■□□□□ 0.04
ACTN1-211ENST00000553882 NPNTQ6UXI9 565 aa15.27■□□□□ 0.04
ACTN1-211ENST00000553882 ZC3H18Q86VM9 953 aaKnown RBP15.27■□□□□ 0.04
ACTN1-211ENST00000553882 MAGEC3Q8TD91 643 aa15.27■□□□□ 0.04
ACTN1-211ENST00000553882 FBF1Q8TES7 1133 aa15.27■□□□□ 0.04
ACTN1-211ENST00000553882 GRAMD1AQ96CP6 724 aa15.27■□□□□ 0.04
ACTN1-211ENST00000553882 PAFAH2Q99487 392 aa15.27■□□□□ 0.04
ACTN1-211ENST00000553882 CDT1Q9H211 546 aa15.27■□□□□ 0.04
ACTN1-211ENST00000553882 RPF1Q9H9Y2 349 aaKnown RBP15.27■□□□□ 0.04
ACTN1-211ENST00000553882 PTPRHQ9HD43 1115 aa15.27■□□□□ 0.04
ACTN1-211ENST00000553882 SMG5Q9UPR3 1016 aaKnown RBP15.27■□□□□ 0.04
ACTN1-211ENST00000553882 M0QYV0 167 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 TYROBPO43914 113 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 B4GALT4O60513 344 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 GRAP2O75791 330 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 PROZP22891 400 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 TARSP26639 723 aaKnown RBP15.27■□□□□ 0.03
ACTN1-211ENST00000553882 GSCP56915 257 aaPredicted RBP15.27■□□□□ 0.03
ACTN1-211ENST00000553882 EIF3EP60228 445 aaKnown RBP15.27■□□□□ 0.03
ACTN1-211ENST00000553882 PDK4Q16654 411 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 SH3D19Q5HYK7 790 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 EFCAB12Q6NXP0 572 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 BBS12Q6ZW61 710 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 ASRGL1Q7L266 308 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 VSIG1Q86XK7 387 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 NAT8LQ8N9F0 302 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 SLC4A11Q8NBS3 891 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 UBA3Q8TBC4 463 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 SPATA18Q8TC71 538 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 ARHGEF3Q9NR81 526 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 RGS17Q9UGC6 210 aaPredicted RBP15.27■□□□□ 0.03
ACTN1-211ENST00000553882 CHMP2BQ9UQN3 213 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 CHKBQ9Y259 395 aa15.27■□□□□ 0.03
ACTN1-211ENST00000553882 GPR25O00155 361 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 MED7O43513 233 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 UNC5CO95185 931 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 RBP3P10745 1247 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 ADRA1DP25100 572 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 MSH2P43246 934 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 IRX3P78415 501 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-211ENST00000553882 CDO1Q16878 200 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 EFHC2Q5JST6 749 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 NOL9Q5SY16 702 aaKnown RBP15.26■□□□□ 0.03
ACTN1-211ENST00000553882 PALM2Q8IXS6 379 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 ATP11CQ8NB49 1132 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 ELOVL4Q9GZR5 314 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 ASCC2Q9H1I8 757 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-211ENST00000553882 C2orf40Q9H1Z8 148 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 ALG13Q9NP73 1137 aaKnown RBP15.26■□□□□ 0.03
ACTN1-211ENST00000553882 SENP1Q9P0U3 644 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 SLC24A2Q9UI40 661 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 XPO7Q9UIA9 1087 aaKnown RBP15.26■□□□□ 0.03
ACTN1-211ENST00000553882 MCM8Q9UJA3 840 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 STARD13Q9Y3M8 1113 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 DNAH12Q6ZR08 3092 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 MICAL2O94851 1124 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 PTPN11Q06124 597 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms