RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 C1SP09871 688 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 BTF3P20290 206 aaKnown RBP4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 PRKAR1BP31321 381 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 IL6STP40189 918 aaPredicted RBP4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 ALDH9A1P49189 494 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 MTHFSP49914 203 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 DGKEP52429 567 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 COPAP53621 1224 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 SLC25A3Q00325 362 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 EFEMP1Q12805 493 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 BLMHQ13867 455 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 KRT72Q14CN4 511 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 ICE2Q659A1 982 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 SP5Q6BEB4 398 aaPredicted RBP4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 PLAG1Q6DJT9 500 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 MZT2AQ6P582 158 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 USP17L6PQ6QN14 398 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 TSHZ1Q6ZSZ6 1077 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 PRRT2Q7Z6L0 340 aaPredicted RBP4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 HAS1Q92839 578 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 TRIM63Q969Q1 353 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 NACC2Q96BF6 587 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 FAM136AQ96C01 138 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 PTCD3Q96EY7 689 aaKnown RBP4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 SNX27Q96L92 541 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 OSBPL9Q96SU4 736 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 C1QTNF3Q9BXJ4 246 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 ACTRT3Q9BYD9 372 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 STK33Q9BYT3 514 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 ZCWPW1Q9H0M4 648 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 FAM83DQ9H4H8 585 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 CXorf36Q9H7Y0 433 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 UNKLQ9H9P5 680 aaKnown RBP4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 CASS4Q9NQ75 786 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 TMEM74BQ9NUR3 256 aa4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 NDRG4Q9ULP0 352 aaKnown RBP4.3□□□□□ -1.72
EFCAB11-204ENST00000553871 LOC102724159A0A0B4J2E5 919 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 PLA2G6O60733 806 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 SPDEFO95238 335 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 PEX11BO96011 259 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 ITGAMP11215 1152 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 KCNA3P22001 575 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 PDE6CP51160 858 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 TP53BP2Q13625 1128 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 TUBA3CQ13748 450 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 DHX8Q14562 1220 aaKnown RBP4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 KCNAB1Q14722 419 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 PWP2Q15269 919 aaKnown RBP4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 PUM3Q15397 648 aaKnown RBP4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 CDSNQ15517 529 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 ZIK1Q3SY52 487 aaPredicted RBP4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 CCDC38Q502W7 563 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 CERCAMQ5T4B2 595 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 DEPDC1Q5TB30 811 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 FAXCQ5TGI0 409 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 VPS53Q5VIR6 699 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 FCRL6Q6DN72 434 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 ERAP2Q6P179 960 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 TUBA3EQ6PEY2 450 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 CCDC174Q6PII3 467 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 CRTC1Q6UUV9 634 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 KRT28Q7Z3Y7 464 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 TMPRSS9Q7Z410 1059 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 KCTD20Q7Z5Y7 419 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 VGLL2Q8N8G2 317 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 ANKRD42Q8N9B4 389 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 TOR1AIP2Q8NFQ8 470 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 SLC30A5Q8TAD4 765 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 DNAJB14Q8TBM8 379 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 PROKR1Q8TCW9 393 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 SSH3Q8TE77 659 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 SH3RF3Q8TEJ3 882 aaPredicted RBP4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 OSCP1Q8WVF1 389 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 ATRIPQ8WXE1 791 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 CCT6BQ92526 530 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 GPR20Q99678 358 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 ADAM2Q99965 735 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 TM7SF3Q9NS93 570 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 ANKFY1Q9P2R3 1169 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 RGS17Q9UGC6 210 aaPredicted RBP4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 FZD1Q9UP38 647 aa4.29□□□□□ -1.72
EFCAB11-204ENST00000553871 TMEM200CA6NKL6 621 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 CCNT2O60583 730 aaKnown RBP4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 LPXNO60711 386 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 NBNO60934 754 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 COQ9O75208 318 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 PPP3CBP16298 524 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 NR4A1P22736 598 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 GATA3P23771 443 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 ATICP31939 592 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 CHKAP35790 457 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 ITIH3Q06033 890 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 EIF2B5Q13144 721 aaKnown RBP4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 PTPAQ15257 358 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 SF3B3Q15393 1217 aaKnown RBP4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 NPY5RQ15761 445 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 ZNF750Q32MQ0 723 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 LY6G5CQ5SRR4 150 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 TEDDM1Q5T9Z0 273 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms