RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 SLC13A4Q9UKG4 626 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 SHOC2Q9UQ13 582 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.48□□□□□ -1.69
TDP1-207ENST00000553617 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 PRSS47A8MTI9 375 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 RFXAPO00287 272 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 POLRMTO00411 1230 aaKnown RBP4.47□□□□□ -1.69
TDP1-207ENST00000553617 SNX2O60749 519 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 VPS4BO75351 444 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 PIAS2O75928 621 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 MBD4O95243 580 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 INHBBP09529 407 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 CAPN3P20807 821 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 MGAT1P26572 445 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 LRPAP1P30533 357 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 AFF3P51826 1226 aaKnown RBP4.47□□□□□ -1.69
TDP1-207ENST00000553617 LOXL3P58215 753 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 PIGFQ07326 219 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 ATP1A4Q13733 1029 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 MGAT5BQ3V5L5 792 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 TRIM60Q495X7 471 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 ZNF385BQ569K4 471 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 TAPT1Q6NXT6 567 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 TAF2Q6P1X5 1199 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 ATG14Q6ZNE5 492 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 C2CD5Q86YS7 1000 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 PSD4Q8NDX1 1056 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 MDGA1Q8NFP4 955 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 SMCR8Q8TEV9 937 aaPredicted RBP4.47□□□□□ -1.69
TDP1-207ENST00000553617 ST8SIA2Q92186 375 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 SDCCAG3Q96C92 435 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 MED15Q96RN5 788 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 TRIB1Q96RU8 372 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 SMOQ99835 787 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 PLA2G12BQ9BX93 195 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 MEGF9Q9H1U4 602 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 C12orf65Q9H3J6 166 aaKnown RBP4.47□□□□□ -1.69
TDP1-207ENST00000553617 HELLSQ9NRZ9 838 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 CTTNBP2NLQ9P2B4 639 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 SMG5Q9UPR3 1016 aaKnown RBP4.47□□□□□ -1.69
TDP1-207ENST00000553617 HDAC5Q9UQL6 1122 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 CDYLQ9Y232 598 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 HPSEQ9Y251 543 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 RPS6KL1Q9Y6S9 549 aa4.47□□□□□ -1.69
TDP1-207ENST00000553617 DNPH1O43598 174 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 NOBOXO60393 691 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 CDC14BO60729 498 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 COQ9O75208 318 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 SOAT2O75908 522 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 USP1O94782 785 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 TK1P04183 234 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 C8AP07357 584 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 ANXA6P08133 673 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 JUPP14923 745 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 GNAT2P19087 354 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 KCNA3P22001 575 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 LIFRP42702 1097 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 TUBP50607 506 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 PAPOLAP51003 745 aaKnown RBP4.46□□□□□ -1.7
TDP1-207ENST00000553617 CCR5P51681 352 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 DGKEP52429 567 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 ALDH18A1P54886 795 aaKnown RBP4.46□□□□□ -1.7
TDP1-207ENST00000553617 SLURP1P55000 103 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 LILRA4P59901 499 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 KIAA2012Q0VF49 1180 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 SCAPQ12770 1279 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 CUL4BQ13620 913 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 DCAF17Q5H9S7 520 aaPredicted RBP4.46□□□□□ -1.7
TDP1-207ENST00000553617 FAM102AQ5T9C2 384 aaPredicted RBP4.46□□□□□ -1.7
TDP1-207ENST00000553617 TTC22Q5TAA0 569 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 AGAP9Q5VTM2 703 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 C1QL3Q5VWW1 255 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 ABLIM2Q6H8Q1 611 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 FAM180BQ6P0A1 224 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 TBC1D1Q86TI0 1168 aaPredicted RBP4.46□□□□□ -1.7
TDP1-207ENST00000553617 CCDC117Q8IWD4 279 aaPredicted RBP4.46□□□□□ -1.7
TDP1-207ENST00000553617 RHOT2Q8IXI1 618 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 SP8Q8IXZ3 490 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 BPIFB1Q8TDL5 484 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 RUBCNQ92622 972 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 MARS2Q96GW9 593 aaKnown RBP4.46□□□□□ -1.7
TDP1-207ENST00000553617 MAELQ96JY0 434 aaKnown RBP4.46□□□□□ -1.7
TDP1-207ENST00000553617 SLC26A6Q9BXS9 759 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 TRIM5Q9C035 493 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 OSBPL5Q9H0X9 879 aaPredicted RBP4.46□□□□□ -1.7
TDP1-207ENST00000553617 TMX4Q9H1E5 349 aaPredicted RBP4.46□□□□□ -1.7
TDP1-207ENST00000553617 SLC25A32Q9H2D1 315 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 SPON1Q9HCB6 807 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 TMEM160Q9NX00 188 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 TMOD4Q9NZQ9 345 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 HSFX1Q9UBD0 423 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 ITIH6Q6UXX5 1313 aa4.46□□□□□ -1.7
TDP1-207ENST00000553617 CCDC195A0A1B0GUA6 201 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 CCDC78A2IDD5 438 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 FAM90A18PA6NE21 464 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 FAM90A16PA6NEW6 464 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 TCAF2A6NFQ2 919 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 HMX3A6NHT5 357 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 A6NLC8 198 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 FAM90A9PA6NNJ1 464 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms