RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 NT5C1AQ9BXI3 368 aa7.73□□□□□ -1.17
ATXN3-221ENST00000553498 FRMD8P1Q9BZ68 369 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-221ENST00000553498 GRIP2Q9C0E4 1043 aa7.73□□□□□ -1.17
ATXN3-221ENST00000553498 TSPYL1Q9H0U9 437 aa7.73□□□□□ -1.17
ATXN3-221ENST00000553498 GOLPH3Q9H4A6 298 aa7.73□□□□□ -1.17
ATXN3-221ENST00000553498 LRRC19Q9H756 370 aa7.73□□□□□ -1.17
ATXN3-221ENST00000553498 EPB41L5Q9HCM4 733 aa7.73□□□□□ -1.17
ATXN3-221ENST00000553498 DDX56Q9NY93 547 aaKnown RBP7.73□□□□□ -1.17
ATXN3-221ENST00000553498 AGAP1Q9UPQ3 857 aa7.73□□□□□ -1.17
ATXN3-221ENST00000553498 EFR3BQ9Y2G0 817 aa7.73□□□□□ -1.17
ATXN3-221ENST00000553498 SQORQ9Y6N5 450 aa7.73□□□□□ -1.17
ATXN3-221ENST00000553498 UMODL1Q5DID0 1318 aa7.73□□□□□ -1.17
ATXN3-221ENST00000553498 TCRBV5S1A1TA0A578 114 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 GOLGA6BA6NDN3 693 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 SIGLEC16A6NMB1 481 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 A6NNZ2 444 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 NPTXRO95502 500 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 IL2RAP01589 272 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 GLI1P08151 1106 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 CD19P15391 556 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 GMPRP36959 345 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 SCNN1AP37088 669 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 PSMC4P43686 418 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 RAD23BP54727 409 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 USP4Q13107 963 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 ARHGEF6Q15052 776 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 CCL14Q16627 93 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 TUBB8Q3ZCM7 444 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 PRAMEF19Q5SWL8 479 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 CFAP58Q5T655 872 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 DCUN1D2Q6PH85 259 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 LCLAT1Q6UWP7 414 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 MMS22LQ6ZRQ5 1243 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 CROCCP2Q86T23 111 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 DNAAF5Q86Y56 855 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 HOMEZQ8IX15 550 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 KLHL7Q8IXQ5 586 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 TMEM192Q8IY95 271 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 RCOR2Q8IZ40 523 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 PCSK9Q8NBP7 692 aaKnown RBP7.72□□□□□ -1.17
ATXN3-221ENST00000553498 SLC4A11Q8NBS3 891 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 CCHCR1Q8TD31 782 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 IPO4Q8TEX9 1081 aaKnown RBP7.72□□□□□ -1.17
ATXN3-221ENST00000553498 HDAC7Q8WUI4 952 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 DNAJB3Q8WWF6 145 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 IRF7Q92985 503 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 C18orf8Q96DM3 657 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 ZBTB10Q96DT7 871 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 OSMRQ99650 979 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 C11orf70Q9BRQ4 267 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 ERP44Q9BS26 406 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 TRAIPQ9BWF2 469 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 AP1M1Q9BXS5 423 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 SEZ6LQ9BYH1 1024 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 CELF4Q9BZC1 486 aaKnown RBP7.72□□□□□ -1.17
ATXN3-221ENST00000553498 FAM49AQ9H0Q0 323 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-221ENST00000553498 SLC38A7Q9NVC3 462 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 GDAP2Q9NXN4 497 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 SMARCAL1Q9NZC9 954 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 EHD2Q9NZN4 543 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 GTF2IRD1Q9UHL9 959 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 ABT1Q9ULW3 272 aaKnown RBP7.72□□□□□ -1.17
ATXN3-221ENST00000553498 HPCAL4Q9UM19 191 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.72□□□□□ -1.17
ATXN3-221ENST00000553498 TRPV2Q9Y5S1 764 aa7.72□□□□□ -1.17
ATXN3-221ENST00000553498 TMEM110-MUSTN1A8MSY1 372 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 GOLGA8KD6RF30 607 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 MEN1O00255 615 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 O00370 1275 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 GPR182O15218 404 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 MEFVO15553 781 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 TREHO43280 583 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 HSF2BPO75031 334 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 GAS8O95995 478 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 MYCP01106 439 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 KRT7P08729 469 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 C6orf222P0C671 652 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 PYGMP11217 842 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 KRT3P12035 628 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 SKIP12755 728 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 BRD2P25440 801 aaKnown RBP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 HSPA9P38646 679 aaKnown RBP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 RAB27AP51159 221 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 MRPS6P82932 125 aaKnown RBP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 CBX1P83916 185 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 SLC7A5Q01650 507 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 CAV1Q03135 178 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 CCNG2Q16589 344 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 HADHQ16836 314 aaKnown RBP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 SV2CQ496J9 727 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 ODF2Q5BJF6 829 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 GNASQ5JWF2 1037 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 DUPD1Q68J44 220 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 DRICH1Q6PGQ1 229 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 LRIG3Q6UXM1 1119 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 RUFY4Q6ZNE9 571 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 CEP128Q6ZU80 1094 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 SND1Q7KZF4 910 aaKnown RBP eCLIP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 ARCQ7LC44 396 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms