RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 NT5C1BQ96P26 610 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 FAM107BQ9H098 131 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 INTS2Q9H0H0 1204 aaKnown RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 NDST4Q9H3R1 872 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 DPEP3Q9H4B8 488 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 TMLHEQ9NVH6 421 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 DONSONQ9NYP3 566 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 HMGXB4Q9UGU5 601 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 CDH9Q9ULB4 789 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 COQ4Q9Y3A0 265 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 USP15Q9Y4E8 981 aaPredicted RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 SPTBN5Q9NRC6 3674 aaKnown RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 A0A0C4DFX4 3053 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 GOLGA6L9A6NEM1 432 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 GRXCR2A6NFK2 248 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 EIF3CLB5ME19 914 aaKnown RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 P4HA2O15460 535 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 SLC34A2O95436 690 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 LMAN1P49257 510 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 NDST1P52848 882 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 TWF1Q12792 350 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 SMAD4Q13485 552 aaKnown RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 KRT31Q15323 416 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 CDKAL1Q5VV42 579 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 GBP6Q6ZN66 633 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 RSRC2Q7L4I2 434 aaKnown RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 RRAGAQ7L523 313 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 LIMS2Q7Z4I7 341 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 SPATA2LQ8IUW3 424 aaPredicted RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 TCEAL8Q8IYN2 117 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 B3GALNT2Q8NCR0 500 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 SPATA18Q8TC71 538 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 HDAC7Q8WUI4 952 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 ATXN2LQ8WWM7 1075 aaKnown RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 ZBTB9Q96C00 473 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 EIF3CQ99613 913 aaKnown RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 TACO1Q9BSH4 297 aaKnown RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 BCO2Q9BYV7 579 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 RHOBTB2Q9BYZ6 727 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 ADAM7Q9H2U9 754 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 CRISPLD1Q9H336 500 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 CRTAC1Q9NQ79 661 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 NME7Q9Y5B8 376 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 PCDHB5Q9Y5E4 795 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 INSL5Q9Y5Q6 135 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 PTPRDP23468 1912 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 MBTPS2O43462 519 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 XYLBO75191 536 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 SEC31AO94979 1220 aaKnown RBP10.57□□□□□ -0.72
LETMD1-234ENST00000552645 VNN2O95498 520 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 ATP1A3P13637 1013 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 IL9P15248 144 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 PTPN1P18031 435 aaKnown RBP10.57□□□□□ -0.72
LETMD1-234ENST00000552645 TRIM21P19474 475 aaKnown RBP10.57□□□□□ -0.72
LETMD1-234ENST00000552645 SLC9A1P19634 815 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 CYP2F1P24903 491 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 ALDH1A3P47895 512 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 TUBB4BP68371 445 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 APBA1Q02410 837 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 ITIH3Q06033 890 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 CUL2Q13617 745 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 CBX2Q14781 532 aaPredicted RBP10.57□□□□□ -0.72
LETMD1-234ENST00000552645 NCAPHQ15003 741 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 NFE2Q16621 373 aaPredicted RBP10.57□□□□□ -0.72
LETMD1-234ENST00000552645 EXOC3L4Q17RC7 722 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 MIIPQ5JXC2 388 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 ATAT1Q5SQI0 421 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 TRIM65Q6PJ69 517 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 ARHGEF19Q8IW93 802 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 SCN4BQ8IWT1 228 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 ELMOD1Q8N336 334 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 EHBP1Q8NDI1 1231 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 GPR152Q8TDT2 470 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 MYLPFQ96A32 169 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 TNIP3Q96KP6 325 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 RIPOR3Q96MK2 946 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 ASB2Q96Q27 587 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 MED10Q9BTT4 135 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 PRKD2Q9BZL6 878 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 S1PR5Q9H228 398 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 CYP3A43Q9HB55 503 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 CISHQ9NSE2 258 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 FAM49BQ9NUQ9 324 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 HCFC1R1Q9NWW0 138 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 ZDHHC7Q9NXF8 308 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 BCCIPQ9P287 314 aaKnown RBP eCLIP10.57□□□□□ -0.72
LETMD1-234ENST00000552645 FAM50BQ9Y247 325 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 YIPF1Q9Y548 306 aa10.57□□□□□ -0.72
LETMD1-234ENST00000552645 CLDN5O00501 218 aa10.56□□□□□ -0.72
LETMD1-234ENST00000552645 PMM2O15305 246 aa10.56□□□□□ -0.72
LETMD1-234ENST00000552645 C1RP00736 705 aa10.56□□□□□ -0.72
LETMD1-234ENST00000552645 HNRNPA1P09651 372 aaKnown RBP eCLIP10.56□□□□□ -0.72
LETMD1-234ENST00000552645 BDNFP23560 247 aa10.56□□□□□ -0.72
LETMD1-234ENST00000552645 TBXAS1P24557 533 aaPredicted RBP10.56□□□□□ -0.72
LETMD1-234ENST00000552645 EPHB3P54753 998 aa10.56□□□□□ -0.72
LETMD1-234ENST00000552645 SMARCB1Q12824 385 aa10.56□□□□□ -0.72
LETMD1-234ENST00000552645 MAPRE1Q15691 268 aaKnown RBP10.56□□□□□ -0.72
LETMD1-234ENST00000552645 C4orf50Q6ZRC1 276 aa10.56□□□□□ -0.72
LETMD1-234ENST00000552645 GRASPQ7Z6J2 395 aaPredicted RBP10.56□□□□□ -0.72
LETMD1-234ENST00000552645 GPR149Q86SP6 731 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms