RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 RNF8O76064 485 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 KDELR1P24390 212 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 ZNF143P52747 638 aaPredicted RBP14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 CRYBB1P53674 252 aaPredicted RBP14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 VCPP55072 806 aaKnown RBP14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 SMTNL2Q2TAL5 461 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 PKDCCQ504Y2 493 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 UBXN11Q5T124 520 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 C6orf118Q5T5N4 469 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 IZUMO3Q5VZ72 239 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 OR6B2Q6IFH4 312 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 CHADLQ6NUI6 762 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 RGMBQ6NW40 437 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 ACOT1Q86TX2 421 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 NME8Q8N427 588 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 ALLCQ8N6M5 410 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 CCHCR1Q8TD31 782 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 SOCS4Q8WXH5 440 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 NKD2Q969F2 451 aaPredicted RBP14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 NME7Q9Y5B8 376 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 SMIM28A0A1B0GU29 152 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 TLDC2A0PJX2 215 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 DCDC2CA8MYV0 355 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 E5RJQ4 531 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 PIRO00625 290 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 TRUB2O95900 331 aaKnown RBP14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 CD4P01730 458 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 GNAT1P11488 350 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 MIPP30301 263 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 HOXC8P31273 242 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 LSP1P33241 339 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 INHBEP58166 350 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 PURAQ00577 322 aaKnown RBP14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 OASLQ15646 514 aaKnown RBP14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 FSCN1Q16658 493 aaKnown RBP14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 XKR4Q5GH76 650 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 KCNT1Q5JUK3 1230 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 HIBCHQ6NVY1 386 aaPredicted RBP14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 FAM183BPQ6ZVS7 135 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 PRUNE1Q86TP1 453 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 UNC93AQ86WB7 457 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 CMASQ8NFW8 434 aaPredicted RBP14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 UHMK1Q8TAS1 419 aaKnown RBP14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 TSPAN18Q96SJ8 248 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 CNPY3Q9BT09 278 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 ZFYVE28Q9HCC9 887 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 RNF19AQ9NV58 838 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 PCSK1NQ9UHG2 260 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 SLC12A6Q9UHW9 1150 aa14.73□□□□□ -0.05
RAB3IP-216ENST00000552199 C2CD4BA6NLJ0 364 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 TNPO2O14787 897 aaKnown RBP14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 ITGAVP06756 1048 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 SETSIPP0DME0 302 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 KCNE1P15382 129 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 GPD1P21695 349 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 PCK1P35558 622 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 SOWAHAQ2M3V2 549 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 BBS12Q6ZW61 710 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 SAPCD2Q86UD0 394 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 TTC30AQ86WT1 665 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 BCAS4Q8TDM0 211 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 RXFP2Q8WXD0 754 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 HAUS1Q96CS2 278 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 DDX23Q9BUQ8 820 aaKnown RBP14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 SLC4A5Q9BY07 1137 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 FRMD8P1Q9BZ68 369 aaPredicted RBP14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 FOXP3Q9BZS1 431 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 ROPN1BQ9BZX4 212 aaPredicted RBP14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 RNF39Q9H2S5 420 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 ROPN1Q9HAT0 212 aaPredicted RBP14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 KLK14Q9P0G3 267 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 USP18Q9UMW8 372 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 PIK3R2O00459 728 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 RGS16O15492 202 aaPredicted RBP14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 TTC4O95801 387 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 SLC10A3P09131 477 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 RGS7P49802 495 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 PTGISQ16647 500 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 P3H1Q32P28 736 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 ARHGAP17Q68EM7 881 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 TRNP1Q6NT89 227 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 PMF1Q6P1K2 205 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 C7orf31Q8N865 590 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 GLIS1Q8NBF1 620 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 TTC13Q8NBP0 860 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 KCTD6Q8NC69 237 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 OR6B3Q8NGW1 331 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 SLC35B2Q8TB61 432 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 ADAM7Q9H2U9 754 aa14.72□□□□□ -0.05
RAB3IP-216ENST00000552199 SRRM3A6NNA2 597 aaPredicted RBP14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 TULP2O00295 520 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 DNALI1O14645 258 aaPredicted RBP14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 RASGRF2O14827 1237 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 XPOTO43592 962 aaKnown RBP14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 CST8O60676 142 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 ZSCAN5DPP0CG00 497 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 AKR1A1P14550 325 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 PDGFRAP16234 1089 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 ARSEP51690 589 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 FBXO47Q5MNV8 452 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms