RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 WDR44Q5JSH3 913 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 TDRD10Q5VZ19 366 aaKnown RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 PARM1Q6UWI2 310 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 LYPD8Q6UX82 237 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 LRRTM3Q86VH5 581 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 OSTM1Q86WC4 334 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 CREBRFQ8IUR6 639 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 NPAS3Q8IXF0 933 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 ELOA2Q8IYF1 753 aaPredicted RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 SLC44A3Q8N4M1 653 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 FBXL6Q8N531 539 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 ST13P5Q8NFI4 369 aaPredicted RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 TMEM174Q8WUU8 243 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 TAF4BQ92750 862 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 PSMG2Q969U7 264 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 TCEAL4Q96EI5 215 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 EEF2KMTQ96G04 330 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 DHTKD1Q96HY7 919 aaPredicted RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 TNIP3Q96KP6 325 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 KXD1Q9BQD3 176 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 LPIN3Q9BQK8 851 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 RTP3Q9BQQ7 232 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 MKNK1Q9BUB5 465 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 CRISPLD1Q9H336 500 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 ZFP14Q9HCL3 533 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 AVENQ9NQS1 362 aaPredicted RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 EHD2Q9NZN4 543 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 CEP72Q9P209 647 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 UXTQ9UBK9 157 aaPredicted RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 MAN1B1Q9UKM7 699 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 CA14Q9ULX7 337 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 DUSP12Q9UNI6 340 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 NUMBLQ9Y6R0 609 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 MYBPHLA2RUH7 354 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 TRIM49BA6NDI0 452 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 GABRDO14764 452 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 NARSO43776 548 aaKnown RBP6.29□□□□□ -1.4
CCDC65-204ENST00000552188 ATP2C2O75185 946 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 AKAP3O75969 853 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 MICAL2O94851 1124 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 HLA-DRAP01903 254 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 CCNYL3P0C7X3 344 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 SRFP11831 508 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 PTPN1P18031 435 aaKnown RBP6.29□□□□□ -1.4
CCDC65-204ENST00000552188 CYP2F1P24903 491 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 LMO2P25791 158 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 GTF2H1P32780 548 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 GGCXP38435 758 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 RAP1GAPP47736 663 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 MXI1P50539 228 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 CDH8P55286 799 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 PFKPQ01813 784 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 ENPEPQ07075 957 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 CETN1Q12798 172 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 HTR4Q13639 388 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 TEAD2Q15562 447 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 DDR2Q16832 855 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 PTPRNQ16849 979 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 SLC5A9Q2M3M2 681 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 ZACNQ401N2 412 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 COBLL1Q53SF7 1204 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 PRSS36Q5K4E3 855 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 GPR158Q5T848 1215 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 KRT39Q6A163 491 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 ANKRD40Q6AI12 368 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 DESI1Q6ICB0 168 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 HFE2Q6ZVN8 426 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 SV2AQ7L0J3 742 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 BMP8AQ7Z5Y6 402 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 ADSSL1Q8N142 457 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 SIX5Q8N196 739 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 TTC9BQ8N6N2 239 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 TRIML1Q8N9V2 468 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 B3GALNT2Q8NCR0 500 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 TTC16Q8NEE8 873 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 CXorf38Q8TB03 319 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 ZSCAN18Q8TBC5 510 aaPredicted RBP6.29□□□□□ -1.4
CCDC65-204ENST00000552188 MYCBPAPQ8TBZ2 947 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 PLEKHO2Q8TD55 490 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 GPR152Q8TDT2 470 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 CSGALNACT1Q8TDX6 532 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 EPS8L1Q8TE68 723 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 NELFBQ8WX92 580 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 MRPS31Q92665 395 aaKnown RBP6.29□□□□□ -1.4
CCDC65-204ENST00000552188 FGF14Q92915 247 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 MYLPFQ96A32 169 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 E2F7Q96AV8 911 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 FUBP3Q96I24 572 aaKnown RBP eCLIP6.29□□□□□ -1.4
CCDC65-204ENST00000552188 SHDQ96IW2 340 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 MRPL45Q9BRJ2 306 aaKnown RBP6.29□□□□□ -1.4
CCDC65-204ENST00000552188 TRMT61BQ9BVS5 477 aaKnown RBP6.29□□□□□ -1.4
CCDC65-204ENST00000552188 ELOVL4Q9GZR5 314 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 SMOC2Q9H3U7 446 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 BRD9Q9H8M2 597 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 METTL14Q9HCE5 456 aaKnown RBP6.29□□□□□ -1.4
CCDC65-204ENST00000552188 TMEM8AQ9HCN3 771 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 ABCB6Q9NP58 842 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 TMLHEQ9NVH6 421 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 MAP10Q9P2G4 905 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms