RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 TULP1O00294 542 aaPredicted RBP23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 GABRDO14764 452 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 TCF3P15923 654 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 LONP1P36776 959 aaKnown RBP23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 MYL7Q01449 175 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 ZNF252P-AS1Q0IIN9 211 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 FOXC1Q12948 553 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 NR1H3Q13133 447 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 CFAP221Q4G0U5 840 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 USP39Q53GS9 565 aaKnown RBP23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 C2orf27AQ580R0 203 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 USP49Q70CQ1 688 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 SCN4BQ8IWT1 228 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 TMEM86AQ8N2M4 240 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 CSGALNACT2Q8N6G5 542 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 SAAL1Q96ER3 474 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 ANAPC1Q9H1A4 1944 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 NUP205Q92621 2012 aa23.23■■□□□ 1.31
SMARCD1-212ENST00000551966 KHNYNO15037 678 aaKnown RBP23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 ATP2C2O75185 946 aa23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 HDCP19113 662 aa23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 SEC13P55735 322 aa23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 IRX4P78413 519 aa23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 SOWAHAQ2M3V2 549 aa23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 FAM171BQ6P995 826 aa23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 SPATA2LQ8IUW3 424 aaPredicted RBP23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 BRSK2Q8IWQ3 736 aa23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 LRRC52Q8N7C0 313 aa23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 KRI1Q8N9T8 703 aaKnown RBP23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 KDF1Q8NAX2 398 aaPredicted RBP23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 HVCN1Q96D96 273 aa23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 SIX4Q9UIU6 781 aa23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 SNX9Q9Y5X1 595 aa23.22■■□□□ 1.31
SMARCD1-212ENST00000551966 HNRNPLP14866 589 aaKnown RBP eCLIP23.21■■□□□ 1.31
SMARCD1-212ENST00000551966 ANO7Q6IWH7 933 aa23.21■■□□□ 1.31
SMARCD1-212ENST00000551966 CCDC33Q8N5R6 958 aa23.21■■□□□ 1.31
SMARCD1-212ENST00000551966 RASSF8Q8NHQ8 419 aa23.21■■□□□ 1.31
SMARCD1-212ENST00000551966 CACTINQ8WUQ7 758 aaKnown RBP23.21■■□□□ 1.31
SMARCD1-212ENST00000551966 EPSTI1Q96J88 318 aa23.21■■□□□ 1.31
SMARCD1-212ENST00000551966 TMEM9BQ9NQ34 198 aa23.21■■□□□ 1.31
SMARCD1-212ENST00000551966 TBC1D7Q9P0N9 293 aa23.21■■□□□ 1.31
SMARCD1-212ENST00000551966 ARHGAP26Q9UNA1 814 aa23.21■■□□□ 1.31
SMARCD1-212ENST00000551966 THADAQ6YHU6 1953 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 CEACAM1P13688 526 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 CSRP1P21291 193 aaKnown RBP23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 LMO2P25791 158 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 LHX1P48742 406 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 CRY1Q16526 586 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 TMEM92Q6UXU6 159 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 LIMS2Q7Z4I7 341 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 SFTPA1Q8IWL2 248 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 ADGRG2Q8IZP9 1017 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 TOP6BLQ8N6T0 577 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 FSIP1Q8NA03 581 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 MDGA1Q8NFP4 955 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 DNAJC19Q96DA6 116 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 FUBP3Q96I24 572 aaKnown RBP eCLIP23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 TMX3Q96JJ7 454 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 CNOT6LQ96LI5 555 aaKnown RBP23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 MMP17Q9ULZ9 603 aa23.2■■□□□ 1.3
SMARCD1-212ENST00000551966 GOLGA8IPA6NC78 632 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 GOLGA8JA6NMD2 632 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 CHRM1P11229 460 aaPredicted RBP23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 MAGEA11P43364 429 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 USP46P62068 366 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 RBP5P82980 135 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 MESP2Q0VG99 397 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 KCNB1Q14721 858 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 SF3A1Q15459 793 aaKnown RBP23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 L1TD1Q5T7N2 865 aaKnown RBP23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 C11orf74Q86VG3 221 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 ADGRF2Q8IZF7 708 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 CCDC26Q8TAB7 109 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 OLIG1Q8TAK6 271 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 SPATA18Q8TC71 538 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 ACCSQ96QU6 501 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 RNF38Q9H0F5 515 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 MRPL44Q9H9J2 332 aaKnown RBP23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 PDE11AQ9HCR9 933 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 RBAKQ9NYW8 714 aaPredicted RBP23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 ITGA11Q9UKX5 1188 aa23.19■■□□□ 1.3
SMARCD1-212ENST00000551966 MYMKA6NI61 221 aa23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 LEFTY2O00292 366 aa23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 CD2BP2O95400 341 aaKnown RBP23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 NFATC1O95644 943 aa23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 NEFLP07196 543 aa23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 KRT19P08727 400 aa23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 SLC6A11P48066 632 aa23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 DHPSP49366 369 aaPredicted RBP23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 CASP5P51878 434 aa23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 CYP2U1Q7Z449 544 aa23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 FRMD1Q8N878 549 aa23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 KBTBD7Q8WVZ9 684 aa23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 RLN3Q8WXF3 142 aa23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 CRTAC1Q9NQ79 661 aa23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 PTPRDP23468 1912 aa23.18■■□□□ 1.3
SMARCD1-212ENST00000551966 LDHAP00338 332 aaKnown RBP23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 GARTP22102 1010 aa23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 PCSK1P29120 753 aa23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 EMC10Q5UCC4 262 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms