RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 H7C4K7 107 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 TOR1BO14657 336 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 PIP5K1CO60331 668 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 NBNO60934 754 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 NCR1O76036 304 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 NDST3O95803 873 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 HLA-DOAP06340 250 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 TPH1P17752 444 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 KRT17Q04695 432 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 FPGSQ05932 587 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 BEAN1Q3B7T3 259 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 SPDYE7PQ495Y7 208 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 ERICH6BQ5W0A0 696 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 ANO1Q5XXA6 986 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 SP5Q6BEB4 398 aaPredicted RBP5.82□□□□□ -1.48
LIMA1-205ENST00000550592 ARMC6Q6NXE6 501 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 CCDC174Q6PII3 467 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 USP17L6PQ6QN14 398 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 TMEM108Q6UXF1 575 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 KIAA0408Q6ZU52 694 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 ADGRG5Q8IZF4 528 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 FAM9AQ8IZU1 332 aaPredicted RBP5.82□□□□□ -1.48
LIMA1-205ENST00000550592 GLIS1Q8NBF1 620 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 CCDC150Q8NCX0 1101 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 SMCR8Q8TEV9 937 aaPredicted RBP5.82□□□□□ -1.48
LIMA1-205ENST00000550592 C18orf8Q96DM3 657 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 SNX27Q96L92 541 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 OSBPL9Q96SU4 736 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 NELL2Q99435 816 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 GALNT9Q9HCQ5 603 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 HEYLQ9NQ87 328 aaPredicted RBP5.82□□□□□ -1.48
LIMA1-205ENST00000550592 RGL1Q9NZL6 768 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 CEP72Q9P209 647 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 DKK2Q9UBU2 259 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 CDY1Q9Y6F8 540 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 TEX14Q8IWB6 1497 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 NUP160Q12769 1436 aa5.82□□□□□ -1.48
LIMA1-205ENST00000550592 SHROOM2Q13796 1616 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 FAM234BA2RU67 622 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 AQP7P3A6NL99 342 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 MUSKO15146 869 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 RRP9O43818 475 aaKnown RBP5.81□□□□□ -1.48
LIMA1-205ENST00000550592 CREB3O43889 395 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 KCNA3P22001 575 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 PDIA3P30101 505 aaKnown RBP5.81□□□□□ -1.48
LIMA1-205ENST00000550592 PPIFP30405 207 aaKnown RBP5.81□□□□□ -1.48
LIMA1-205ENST00000550592 BMPR1AP36894 532 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 PTDSS1P48651 473 aaKnown RBP5.81□□□□□ -1.48
LIMA1-205ENST00000550592 NDUFV1P49821 464 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 MYO1EQ12965 1108 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 ZNF750Q32MQ0 723 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 CD300EQ496F6 205 aaPredicted RBP5.81□□□□□ -1.48
LIMA1-205ENST00000550592 C4orf46Q504U0 113 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 SFRP4Q6FHJ7 346 aaPredicted RBP5.81□□□□□ -1.48
LIMA1-205ENST00000550592 TLDC1Q6P9B6 456 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 KRT73Q86Y46 540 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 FAM109AQ8N4B1 249 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.81□□□□□ -1.48
LIMA1-205ENST00000550592 ANKRD42Q8N9B4 389 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 IL17DQ8TAD2 202 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 BPIFB1Q8TDL5 484 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 PPP2R3CQ969Q6 453 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 MUL1Q969V5 352 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 FUBP1Q96AE4 644 aaKnown RBP5.81□□□□□ -1.48
LIMA1-205ENST00000550592 C8orf49Q96NF6 230 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 KRTAP4-12Q9BQ66 201 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 AS3MTQ9HBK9 375 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 AGO4Q9HCK5 861 aaKnown RBP5.81□□□□□ -1.48
LIMA1-205ENST00000550592 PARPBPQ9NWS1 579 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 SMPD4Q9NXE4 827 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 MAP3K2Q9Y2U5 619 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 NOX1Q9Y5S8 564 aa5.81□□□□□ -1.48
LIMA1-205ENST00000550592 GRIN2AQ12879 1464 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 F5H697 171 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 hCG_1984214I3L0E3 225 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 PODXLO00592 558 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 TRIAP1O43715 76 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 FAM20BO75063 409 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 SKAP2O75563 359 aaPredicted RBP5.8□□□□□ -1.48
LIMA1-205ENST00000550592 CSTBP04080 98 aaKnown RBP5.8□□□□□ -1.48
LIMA1-205ENST00000550592 IDEP14735 1019 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 GATA3P23771 443 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 ZFP36P26651 326 aaKnown RBP5.8□□□□□ -1.48
LIMA1-205ENST00000550592 CHKAP35790 457 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 NPTX2P47972 431 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 VAV2P52735 878 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 SLC25A3Q00325 362 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 GALNT1Q10472 559 aaPredicted RBP5.8□□□□□ -1.48
LIMA1-205ENST00000550592 RESTQ13127 1097 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 GRM1Q13255 1194 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 BLMHQ13867 455 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 ELF2Q15723 593 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 RAB30Q15771 203 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 PFKFB4Q16877 469 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 ZACNQ401N2 412 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 CCDC38Q502W7 563 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 LCE3BQ5TA77 95 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 GGT6Q6P531 493 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 FBXO38Q6PIJ6 1188 aa5.8□□□□□ -1.48
LIMA1-205ENST00000550592 KCTD20Q7Z5Y7 419 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms