RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CACNA2D4Q7Z3S7 1137 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 CBWD2Q8IUF1 395 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 HPDLQ96IR7 371 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 SYT15Q9BQS2 421 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 TNMDQ9H2S6 317 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 ZSCAN16Q9H4T2 348 aaPredicted RBP23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 DUS2Q9NX74 493 aaKnown RBP23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 CDH9Q9ULB4 789 aa23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 R3HCC1Q9Y3T6 440 aaKnown RBP23.23■■□□□ 1.31
SMARCC2-210ENST00000550519 AXIN1O15169 862 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 AKAP3O75969 853 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 TCF3P15923 654 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 HOXD13P35453 343 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 DUOXA2Q1HG44 320 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 EML3Q32P44 896 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 VSTM1Q6UX27 236 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 STXBP4Q6ZWJ1 553 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 KBTBD6Q86V97 674 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 ARL14EPQ8N8R7 260 aaPredicted RBP23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 FSIP1Q8NA03 581 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 EZH1Q92800 747 aaPredicted RBP23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 ATP2A3Q93084 1043 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 HPS3Q969F9 1004 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 EXOC4Q96A65 974 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 SPATA17Q96L03 361 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 CEP295NLQ96MC4 621 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 ARRDC1-AS1Q9H2J1 176 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 CRTAC1Q9NQ79 661 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 KBTBD4Q9NVX7 518 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 POLR3BQ9NW08 1133 aaPredicted RBP23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 HSPBP1Q9NZL4 362 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 MAGEC2Q9UBF1 373 aaPredicted RBP23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 WNT6Q9Y6F9 365 aa23.22■■□□□ 1.31
SMARCC2-210ENST00000550519 C2orf78A6NCI8 922 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 EPN2O95208 641 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 TNNC2P02585 160 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 ZNF806P0C7X5 589 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 PSMC1P62191 440 aaKnown RBP23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 E2F4Q16254 413 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 PPM1JQ5JR12 505 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 WDR49Q8IV35 697 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 LINC00301Q8NCQ3 95 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 SH3RF2Q8TEC5 729 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 CD101Q93033 1021 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 MYLPFQ96A32 169 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 TRIM9Q9C026 710 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 LRRC27Q9C0I9 530 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 KIAA1586Q9HCI6 787 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 ARHGAP26Q9UNA1 814 aa23.21■■□□□ 1.31
SMARCC2-210ENST00000550519 CCDC192P0DO97 292 aa23.2■■□□□ 1.3
SMARCC2-210ENST00000550519 HDCP19113 662 aa23.2■■□□□ 1.3
SMARCC2-210ENST00000550519 WARSP23381 471 aaKnown RBP23.2■■□□□ 1.3
SMARCC2-210ENST00000550519 IFNAR2P48551 515 aa23.2■■□□□ 1.3
SMARCC2-210ENST00000550519 KCNB1Q14721 858 aa23.2■■□□□ 1.3
SMARCC2-210ENST00000550519 MAPRE1Q15691 268 aaKnown RBP23.2■■□□□ 1.3
SMARCC2-210ENST00000550519 SYT13Q7L8C5 426 aa23.2■■□□□ 1.3
SMARCC2-210ENST00000550519 ZC3H10Q96K80 434 aaKnown RBP23.2■■□□□ 1.3
SMARCC2-210ENST00000550519 ZNF638Q14966 1978 aaKnown RBP23.2■■□□□ 1.3
SMARCC2-210ENST00000550519 CACNA1BQ00975 2339 aa23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 EIF3DO15371 548 aaKnown RBP eCLIP23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 BDNFP23560 247 aa23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 LIMK1P53667 647 aa23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 STK38Q15208 465 aa23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 SF3A2Q15428 464 aaKnown RBP23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 EPM2AIP1Q7L775 607 aaPredicted RBP23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 TRAPPC11Q7Z392 1133 aa23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 TTC16Q8NEE8 873 aa23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 RPLP0P6Q8NHW5 317 aa23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 ZNF507Q8TCN5 953 aa23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 HHIPQ96QV1 700 aa23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 LINC00597Q9H2U6 94 aa23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 CUEDC2Q9H467 287 aa23.19■■□□□ 1.3
SMARCC2-210ENST00000550519 RALGAPA1Q6GYQ0 2036 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 STX6O43752 255 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 PDGFRBP09619 1106 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 PFKLP17858 780 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 GRIK1P39086 918 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 PDE6CP51160 858 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 USP46P62068 366 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 ZXDBP98169 803 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 NR1H3Q13133 447 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 CCDC6Q16204 474 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 AASDHQ4L235 1098 aaPredicted RBP23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 PLA2G2CQ5R387 149 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 CNNM4Q6P4Q7 775 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 DENND5BQ6ZUT9 1274 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 MYCBPAPQ8TBZ2 947 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 PCED1BQ96HM7 432 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 MMS19Q96T76 1030 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 TTLL2Q9BWV7 592 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 PCDHGA5Q9Y5G8 931 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 ATG2BQ96BY7 2078 aa23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 CNOT1A5YKK6 2376 aaKnown RBP23.18■■□□□ 1.3
SMARCC2-210ENST00000550519 SPTLC2O15270 562 aa23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 TGFB1I1O43294 461 aa23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 PPP6R2O75170 966 aa23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 CST3P01034 146 aaPredicted RBP23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 CYP27A1Q02318 531 aa23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 SNRNP35Q16560 246 aaKnown RBP23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 PLK5Q496M5 336 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms