RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 TTLL5Q6EMB2 1281 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 NAA16Q6N069 864 aaPredicted RBP3.69□□□□□ -1.82
CCNT1-203ENST00000550457 RSRC2Q7L4I2 434 aaKnown RBP3.69□□□□□ -1.82
CCNT1-203ENST00000550457 CCAR1Q8IX12 1150 aaKnown RBP3.69□□□□□ -1.82
CCNT1-203ENST00000550457 C10orf67Q8IYJ2 551 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 AHI1Q8N157 1196 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 TSPYL6Q8N831 410 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 CEP112Q8N8E3 955 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 CLRN3Q8NCR9 226 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 NEK11Q8NG66 645 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 FAM71BQ8TC56 605 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 BICD2Q8TD16 824 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 SSH3Q8TE77 659 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 SCARB1Q8WTV0 552 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 GOLGA1Q92805 767 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 GTF3C6Q969F1 213 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 SMARCE1Q969G3 411 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 RILPL2Q969X0 211 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 MYOCQ99972 504 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 FUT8Q9BYC5 575 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 TMX1Q9H3N1 280 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 LDAHQ9H6V9 325 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 ASB6Q9NWX5 421 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 LRIT1Q9P2V4 623 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 SLC23A1Q9UHI7 598 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 SCOCQ9UIL1 159 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 KCNE5Q9UJ90 142 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 RCOR1Q9UKL0 485 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 RAB21Q9UL25 225 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 IFT172Q9UG01 1749 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 NEXMIFQ5QGS0 1516 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 ARHGEF40Q8TER5 1519 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 LRRC7Q96NW7 1537 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 TULP4Q9NRJ4 1543 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 ATXN2Q99700 1313 aaKnown RBP3.69□□□□□ -1.82
CCNT1-203ENST00000550457 PXDNLA1KZ92 1463 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 ATP7BP35670 1465 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 KIF1BO60333 1816 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 SBNO1A3KN83 1393 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 ANKRD26Q9UPS8 1709 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 A0A087X0B3 334 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 USP27XA6NNY8 438 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 EIF3CLB5ME19 914 aaKnown RBP3.68□□□□□ -1.82
CCNT1-203ENST00000550457 POLR3GO15318 223 aaPredicted RBP3.68□□□□□ -1.82
CCNT1-203ENST00000550457 GPANK1O95872 356 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 POMCP01189 267 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 RAP2AP10114 183 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 ATP5JP18859 108 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 FPR1P21462 350 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 ECHS1P30084 290 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 GUCY1A2P33402 732 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 MAP2K2P36507 400 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 ALDH1A3P47895 512 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 ID4P47928 161 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 LMAN1P49257 510 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 AARSP49588 968 aaKnown RBP eCLIP3.68□□□□□ -1.82
CCNT1-203ENST00000550457 VAV2P52735 878 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 EVCP57679 992 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 PPP3CAQ08209 521 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 ADRM1Q16186 407 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 MAP9Q49MG5 647 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 HSP90AB3PQ58FF7 597 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 CT47A1Q5JQC4 288 aaPredicted RBP3.68□□□□□ -1.82
CCNT1-203ENST00000550457 C1QL2Q7Z5L3 287 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 DHX40Q8IX18 779 aaKnown RBP3.68□□□□□ -1.82
CCNT1-203ENST00000550457 ANKRD20A12PQ8NF67 263 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 APPBP2Q92624 585 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 MFSD3Q96ES6 412 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 PTCD3Q96EY7 689 aaKnown RBP3.68□□□□□ -1.82
CCNT1-203ENST00000550457 JAKMIP1Q96N16 626 aaKnown RBP3.68□□□□□ -1.82
CCNT1-203ENST00000550457 EIF3CQ99613 913 aaKnown RBP3.68□□□□□ -1.82
CCNT1-203ENST00000550457 MEIS3Q99687 375 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 NAA15Q9BXJ9 866 aaKnown RBP3.68□□□□□ -1.82
CCNT1-203ENST00000550457 STK31Q9BXU1 1019 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 REXO4Q9GZR2 422 aaKnown RBP3.68□□□□□ -1.82
CCNT1-203ENST00000550457 DMRT3Q9NQL9 472 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 TRMT1Q9NXH9 659 aaKnown RBP3.68□□□□□ -1.82
CCNT1-203ENST00000550457 KCTD5Q9NXV2 234 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 FAM30AQ9NZY2 134 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 SLC17A6Q9P2U8 582 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 HSFX1Q9UBD0 423 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 ARPP21Q9UBL0 812 aaPredicted RBP3.68□□□□□ -1.82
CCNT1-203ENST00000550457 USP16Q9Y5T5 823 aa3.68□□□□□ -1.82
CCNT1-203ENST00000550457 ABCC3O15438 1527 aa3.67□□□□□ -1.82
CCNT1-203ENST00000550457 ATP7AQ04656 1500 aa3.67□□□□□ -1.82
CCNT1-203ENST00000550457 LOC102724159A0A0B4J2E5 919 aa3.67□□□□□ -1.82
CCNT1-203ENST00000550457 WIPF3A6NGB9 483 aa3.67□□□□□ -1.82
CCNT1-203ENST00000550457 H3BQV1 296 aa3.67□□□□□ -1.82
CCNT1-203ENST00000550457 NEMP1O14524 444 aa3.67□□□□□ -1.82
CCNT1-203ENST00000550457 KIF3BO15066 747 aa3.67□□□□□ -1.82
CCNT1-203ENST00000550457 STX10O60499 249 aa3.67□□□□□ -1.82
CCNT1-203ENST00000550457 PROP1O75360 226 aa3.67□□□□□ -1.82
CCNT1-203ENST00000550457 URI1O94763 535 aaPredicted RBP3.67□□□□□ -1.82
CCNT1-203ENST00000550457 CLSTN1O94985 981 aa3.67□□□□□ -1.82
CCNT1-203ENST00000550457 HMGB1P09429 215 aaKnown RBP3.67□□□□□ -1.82
CCNT1-203ENST00000550457 DDR1Q08345 913 aa3.67□□□□□ -1.82
CCNT1-203ENST00000550457 NECTIN1Q15223 517 aa3.67□□□□□ -1.82
CCNT1-203ENST00000550457 PWP2Q15269 919 aaKnown RBP3.67□□□□□ -1.82
CCNT1-203ENST00000550457 ME3Q16798 604 aa3.67□□□□□ -1.82
CCNT1-203ENST00000550457 GEN1Q17RS7 908 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms