RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 FERP16591 822 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 CDC25BP30305 580 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 GRIK1P39086 918 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 MAGEA11P43364 429 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 TUFMP49411 452 aaKnown RBP22.46■■□□□ 1.19
VPS29-206ENST00000549578 MRE11P49959 708 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 PDE6CP51160 858 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 CNGA2Q16280 664 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 DDR2Q16832 855 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 CTC1Q2NKJ3 1217 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 SDHAF4Q5VUM1 108 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 TAF3Q5VWG9 929 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 LCLAT1Q6UWP7 414 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 VSTM1Q6UX27 236 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 TTC30AQ86WT1 665 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 DRC7Q8IY82 874 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 C12orf76Q8N812 135 aaPredicted RBP22.46■■□□□ 1.19
VPS29-206ENST00000549578 HDAC7Q8WUI4 952 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 SMOQ99835 787 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 DPP7Q9UHL4 492 aa22.46■■□□□ 1.19
VPS29-206ENST00000549578 F8VP50 259 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 TBX10O75333 385 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 ZMYND10O75800 440 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 BEST1O76090 585 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 TPM1P09493 284 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 ATF6P18850 670 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 DLX2Q07687 328 aaPredicted RBP22.45■■□□□ 1.18
VPS29-206ENST00000549578 TWF1Q12792 350 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 COL19A1Q14993 1142 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 ASIC2Q16515 512 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 PPM1LQ5SGD2 360 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 TMEM184AQ6ZMB5 413 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 IRF2BP2Q7Z5L9 587 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 STKLD1Q8NE28 680 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 UBA3Q8TBC4 463 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 FEZF2Q8TBJ5 459 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 GPR152Q8TDT2 470 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 SLC20A1Q8WUM9 679 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 KCNK16Q96T55 309 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 AIPL1Q9NZN9 384 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 HESX1Q9UBX0 185 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 MYH10P35580 1976 aa22.45■■□□□ 1.18
VPS29-206ENST00000549578 M0QYV0 167 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 MED7O43513 233 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 NCK2O43639 380 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 MFAP3LO75121 409 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 SRGAP2BP0DMP2 458 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 NPR3P17342 541 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 ALDH1A3P47895 512 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 ADKP55263 362 aaKnown RBP22.44■■□□□ 1.18
VPS29-206ENST00000549578 MAP3K7CLP57077 242 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 STILQ15468 1287 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 SKIV2LQ15477 1246 aaKnown RBP22.44■■□□□ 1.18
VPS29-206ENST00000549578 ELMSAN1Q6PJG2 1045 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 CLEC20AQ6ZU45 233 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 ANKRD52Q8NB46 1076 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 SPC24Q8NBT2 197 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 ZMIZ2Q8NF64 920 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 DDX1Q92499 740 aaKnown RBP22.44■■□□□ 1.18
VPS29-206ENST00000549578 PABPC5Q96DU9 382 aaKnown RBP22.44■■□□□ 1.18
VPS29-206ENST00000549578 DUSP16Q9BY84 665 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 NUCKS1Q9H1E3 243 aaKnown RBP22.44■■□□□ 1.18
VPS29-206ENST00000549578 DMAP1Q9NPF5 467 aaPredicted RBP22.44■■□□□ 1.18
VPS29-206ENST00000549578 DZANK1Q9NVP4 752 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 CLEC1BQ9P126 229 aa22.44■■□□□ 1.18
VPS29-206ENST00000549578 NOCTQ9UK39 431 aaKnown RBP22.44■■□□□ 1.18
VPS29-206ENST00000549578 LRG1P02750 347 aa22.43■■□□□ 1.18
VPS29-206ENST00000549578 LTBRP36941 435 aa22.43■■□□□ 1.18
VPS29-206ENST00000549578 ANKRD54Q6NXT1 300 aa22.43■■□□□ 1.18
VPS29-206ENST00000549578 DENND1BQ6P3S1 775 aa22.43■■□□□ 1.18
VPS29-206ENST00000549578 FMNL3Q8IVF7 1028 aa22.43■■□□□ 1.18
VPS29-206ENST00000549578 GIPC2Q8TF65 315 aa22.43■■□□□ 1.18
VPS29-206ENST00000549578 APOL5Q9BWW9 433 aa22.43■■□□□ 1.18
VPS29-206ENST00000549578 CSNK1G1Q9HCP0 422 aa22.43■■□□□ 1.18
VPS29-206ENST00000549578 BRWD1Q9NSI6 2320 aa22.43■■□□□ 1.18
VPS29-206ENST00000549578 AKR1B15C9JRZ8 316 aaPredicted RBP22.42■■□□□ 1.18
VPS29-206ENST00000549578 TULP2O00295 520 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 TRIM66O15016 1216 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 CCL16O15467 120 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 MMEP08473 750 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 CCDC172P0C7W6 258 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 BCAT1P54687 386 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 RPL10AP62906 217 aaKnown RBP22.42■■□□□ 1.18
VPS29-206ENST00000549578 PDE4CQ08493 712 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 PKDCCQ504Y2 493 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 SYCE2Q6PIF2 218 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 TMC5Q6UXY8 1006 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.42■■□□□ 1.18
VPS29-206ENST00000549578 PASD1Q8IV76 773 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 SYN2Q92777 582 aaPredicted RBP22.42■■□□□ 1.18
VPS29-206ENST00000549578 SFXN1Q9H9B4 322 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 ZDHHC7Q9NXF8 308 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 PRUNE2Q8WUY3 3088 aa22.42■■□□□ 1.18
VPS29-206ENST00000549578 CCDC195A0A1B0GUA6 201 aa22.41■■□□□ 1.18
VPS29-206ENST00000549578 SKILP12757 684 aa22.41■■□□□ 1.18
VPS29-206ENST00000549578 ANXA13P27216 316 aa22.41■■□□□ 1.18
VPS29-206ENST00000549578 BST2Q10589 180 aaKnown RBP22.41■■□□□ 1.18
VPS29-206ENST00000549578 RARS2Q5T160 578 aaKnown RBP22.41■■□□□ 1.18
VPS29-206ENST00000549578 RTL10Q7L3V2 364 aa22.41■■□□□ 1.18
VPS29-206ENST00000549578 OR8K1Q8NGG5 319 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms