RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 ANXA13P27216 316 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 ADORA2BP29275 332 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 GBP2P32456 591 aaPredicted RBP10.2□□□□□ -0.78
RAB5B-205ENST00000549034 USP8P40818 1118 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 MAGEA11P43364 429 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 GCNT1Q02742 428 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 UBXN1Q04323 297 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 CFAP221Q4G0U5 840 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 FILIP1LQ4L180 1135 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 PABPC1LQ4VXU2 614 aaKnown RBP10.2□□□□□ -0.78
RAB5B-205ENST00000549034 TMEM270Q6UE05 265 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 VSTM1Q6UX27 236 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 PAQR9Q6ZVX9 377 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 PDZD4Q76G19 769 aaPredicted RBP10.2□□□□□ -0.78
RAB5B-205ENST00000549034 SLC4A11Q8NBS3 891 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 SLC2A14Q8TDB8 520 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 FAM81BQ96LP2 452 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 LSM14BQ9BX40 385 aaKnown RBP10.2□□□□□ -0.78
RAB5B-205ENST00000549034 ZNF518BQ9C0D4 1074 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 FAM124BQ9H5Z6 455 aaPredicted RBP10.2□□□□□ -0.78
RAB5B-205ENST00000549034 DNAJC12Q9UKB3 198 aa10.2□□□□□ -0.78
RAB5B-205ENST00000549034 MAGED2Q9UNF1 606 aaPredicted RBP10.2□□□□□ -0.78
RAB5B-205ENST00000549034 MRPS23Q9Y3D9 190 aaKnown RBP10.2□□□□□ -0.78
RAB5B-205ENST00000549034 NOTCH4Q99466 2003 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 CLUHO75153 1309 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 SLC38A8A6NNN8 435 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 ZNF197O14709 1029 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 TRIM66O15016 1216 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 AP1G2O75843 785 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 SERPINC1P01008 464 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 POU2F2P09086 479 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 ATF6P18850 670 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 ACO1P21399 889 aaKnown RBP10.19□□□□□ -0.78
RAB5B-205ENST00000549034 SSTR3P32745 418 aaPredicted RBP10.19□□□□□ -0.78
RAB5B-205ENST00000549034 MAP3K7CLP57077 242 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 MTMR3Q13615 1198 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 PPP1R26Q5T8A7 1209 aaPredicted RBP10.19□□□□□ -0.78
RAB5B-205ENST00000549034 ADHFE1Q8IWW8 467 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 FUKQ8N0W3 1084 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 STKLD1Q8NE28 680 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 ITFG1Q8TB96 612 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 ADAMTS19Q8TE59 1207 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 PSMG2Q969U7 264 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 ACSF2Q96CM8 615 aaPredicted RBP10.19□□□□□ -0.78
RAB5B-205ENST00000549034 MCRS1Q96EZ8 462 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 KREMEN1Q96MU8 473 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 NECAB3Q96P71 396 aaPredicted RBP10.19□□□□□ -0.78
RAB5B-205ENST00000549034 KCNK16Q96T55 309 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 HNRNPABQ99729 332 aaKnown RBP10.19□□□□□ -0.78
RAB5B-205ENST00000549034 ASAH2Q9NR71 780 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 APEX2Q9UBZ4 518 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 PRKAG3Q9UGI9 489 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 KIAA1257Q9ULG3 409 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 NR2E1Q9Y466 385 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 REV3LO60673 3130 aa10.19□□□□□ -0.78
RAB5B-205ENST00000549034 PTPRDP23468 1912 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 F8VP50 259 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 FOXN3O00409 490 aaPredicted RBP10.18□□□□□ -0.78
RAB5B-205ENST00000549034 BEST1O76090 585 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 CALCAP01258 141 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 CSH1P0DML2 217 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 CSH2P0DML3 217 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 VDRP11473 427 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 GJA1P17302 382 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 GABRR2P28476 465 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 KLK7P49862 253 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 CACNA2D1P54289 1103 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 IFRD2Q12894 506 aaPredicted RBP10.18□□□□□ -0.78
RAB5B-205ENST00000549034 SGO2Q562F6 1265 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 KLHDC7AQ5VTJ3 777 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 GET4Q7L5D6 327 aaPredicted RBP10.18□□□□□ -0.78
RAB5B-205ENST00000549034 ENOSF1Q7L5Y1 443 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 OTOP3Q7RTS5 596 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 FAM35AQ86V20 835 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 UBR7Q8N806 425 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 LEMD2Q8NC56 503 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 RBBP8NLQ8NC74 664 aaPredicted RBP10.18□□□□□ -0.78
RAB5B-205ENST00000549034 ING5Q8WYH8 240 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 JAKMIP2Q96AA8 810 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 TCEAL4Q96EI5 215 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 SMARCD1Q96GM5 515 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 SPATA17Q96L03 361 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 C8orf48Q96LL4 319 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 NAP1L5Q96NT1 182 aaPredicted RBP10.18□□□□□ -0.78
RAB5B-205ENST00000549034 ATXN3LQ9H3M9 355 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 ZNF334Q9HCZ1 680 aaPredicted RBP10.18□□□□□ -0.78
RAB5B-205ENST00000549034 SIX2Q9NPC8 291 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.18□□□□□ -0.78
RAB5B-205ENST00000549034 LIMD1Q9UGP4 676 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 COL6A3P12111 3177 aa10.18□□□□□ -0.78
RAB5B-205ENST00000549034 A0A1W2PRU2 124 aa10.17□□□□□ -0.78
RAB5B-205ENST00000549034 LGALS16A8MUM7 142 aa10.17□□□□□ -0.78
RAB5B-205ENST00000549034 C2CD4DB7Z1M9 353 aa10.17□□□□□ -0.78
RAB5B-205ENST00000549034 LOC730098B7Z3J9 87 aa10.17□□□□□ -0.78
RAB5B-205ENST00000549034 TEX33O43247 280 aa10.17□□□□□ -0.78
RAB5B-205ENST00000549034 FGF19O95750 216 aa10.17□□□□□ -0.78
RAB5B-205ENST00000549034 PAEPP09466 180 aa10.17□□□□□ -0.78
RAB5B-205ENST00000549034 FAM200BP0CF97 657 aa10.17□□□□□ -0.78
RAB5B-205ENST00000549034 HMGA1P17096 107 aaKnown RBP10.17□□□□□ -0.78
RAB5B-205ENST00000549034 CCR2P41597 374 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms