RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 PTPN11Q06124 597 aaPredicted RBP8.55□□□□□ -1.04
CCDC65-203ENST00000547861 ZNF252P-AS1Q0IIN9 211 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 DHX34Q14147 1143 aaKnown RBP8.55□□□□□ -1.04
CCDC65-203ENST00000547861 CYP1B1Q16678 543 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 KCTD19Q17RG1 926 aaPredicted RBP8.55□□□□□ -1.04
CCDC65-203ENST00000547861 PTPN20Q4JDL3 420 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 DNAJC24Q6P3W2 148 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 NOTUMQ6P988 496 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 MAATS1Q7Z4T9 603 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 DDX42Q86XP3 938 aaKnown RBP eCLIP8.55□□□□□ -1.04
CCDC65-203ENST00000547861 CD302Q8IX05 232 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 MREGQ8N565 214 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 WDTC1Q8N5D0 677 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 EIF1ADQ8N9N8 165 aaKnown RBP8.55□□□□□ -1.04
CCDC65-203ENST00000547861 SLC43A3Q8NBI5 491 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 FEZF2Q8TBJ5 459 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 TMEM40Q8WWA1 233 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 SEC14L1Q92503 715 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 TIFAQ96CG3 184 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 C18orf8Q96DM3 657 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 HPDLQ96IR7 371 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 KATNAL1Q9BW62 490 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 ZNF518BQ9C0D4 1074 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 TRPV6Q9H1D0 765 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 NXF3Q9H4D5 531 aaKnown RBP8.55□□□□□ -1.04
CCDC65-203ENST00000547861 ZNF576Q9H609 170 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 CYP3A43Q9HB55 503 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 MED4Q9NPJ6 270 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 PARVAQ9NVD7 372 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 SNTG2Q9NY99 539 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 DERAQ9Y315 318 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 CEP83Q9Y592 693 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 GRIN2DO15399 1336 aa8.55□□□□□ -1.04
CCDC65-203ENST00000547861 C17orf102A2RUQ5 167 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 GOLGA6BA6NDN3 693 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 FAM187AA6NFU0 413 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 AGPSO00116 658 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 PPEF2O14830 753 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 DAPK3O43293 454 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 MED7O43513 233 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 CABYRO75952 493 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 RECQL4O94761 1208 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 SYF2O95926 243 aaKnown RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 CHRNA3P32297 505 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 PTGIRP43119 386 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 RPL7AP62424 266 aaKnown RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 RBP5P82980 135 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 DR1Q01658 176 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 INCA1Q0VD86 236 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 CAMK2BQ13554 666 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 ITGA7Q13683 1181 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 HLTFQ14527 1009 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 PCBP1Q15365 356 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 CYP4A22Q5TCH4 519 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 RASIP1Q5U651 963 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 TTC27Q6P3X3 843 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 PSRC1Q6PGN9 363 aaPredicted RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 NLRC5Q86WI3 1866 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 JAMLQ86YT9 394 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 C12orf50Q8NA57 414 aaPredicted RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 ZMAT2Q96NC0 199 aaKnown RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 MCEEQ96PE7 176 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 HERPUD2Q9BSE4 406 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 PBX4Q9BYU1 374 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 RAB17Q9H0T7 212 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 DPH5Q9H2P9 285 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 HIPK3Q9H422 1215 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 IL23AQ9NPF7 189 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 TJP2Q9UDY2 1190 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 TUBGCP4Q9UGJ1 667 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 CYTH4Q9UIA0 394 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 FAN1Q9Y2M0 1017 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 HES2Q9Y543 173 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 NCOR1O75376 2440 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 MUC3AQ02505 3323 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 TMEM191CA6NGB0 347 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 FSCN2O14926 492 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 MICAL2O94851 1124 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 RARAP10276 462 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 EIF4BP23588 611 aaKnown RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 AXLP30530 894 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 GJC1P36383 396 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 GGCXP38435 758 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 HSPA9P38646 679 aaKnown RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 CCL23P55773 120 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 GSCP56915 257 aaPredicted RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 OGDHQ02218 1023 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 HSP90B2PQ58FF3 399 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 DUPD1Q68J44 220 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 ERICH1Q86X53 443 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 RHOT1Q8IXI2 618 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 KATNAL2Q8IYT4 538 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 C3orf20Q8ND61 904 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 RIN2Q8WYP3 895 aaPredicted RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 APOL6Q9BWW8 343 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 PLVAPQ9BX97 442 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 LHX5Q9H2C1 402 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 PLEKHA5Q9HAU0 1116 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms