RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 CD58P19256 250 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 ECHS1P30084 290 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 POLR2BP30876 1174 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 SSTR3P32745 418 aaPredicted RBP17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 ASPAP45381 313 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 ZNF132P52740 706 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 RWDD2BP57060 319 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 HTRA4P83105 476 aaPredicted RBP17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 WDR72Q3MJ13 1102 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 C2CD6Q53TS8 623 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 PPP1R2P3Q6NXS1 205 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 ALKAL1Q6UXT8 129 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 SCARA5Q6ZMJ2 495 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 ZNF606Q8WXB4 792 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 VCPIP1Q96JH7 1222 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 ADAM22Q9P0K1 906 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 POLIQ9UNA4 740 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 IPPQ9Y573 584 aa17.5■□□□□ 0.39
CHMP1A-204ENST00000547687 C5orf42Q9H799 3197 aa17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 DAPK3O43293 454 aa17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 OPA1O60313 960 aa17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 WEE2P0C1S8 567 aa17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 GATMP50440 423 aa17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 DR1Q01658 176 aa17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 GLRA4Q5JXX5 417 aa17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 PHF13Q86YI8 300 aaPredicted RBP17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 SMG8Q8ND04 991 aaKnown RBP17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 SEC14L1Q92503 715 aa17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 RUFY1Q96T51 708 aa17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 CISHQ9NSE2 258 aa17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 KLK14Q9P0G3 267 aa17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 PARP2Q9UGN5 583 aa17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 AGAP1Q9UPQ3 857 aa17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 FNDC1Q4ZHG4 1894 aaPredicted RBP17.49■□□□□ 0.39
CHMP1A-204ENST00000547687 MYO1FO00160 1098 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 SLC1A1P43005 524 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 ZNF667Q5HYK9 610 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 CFAP58Q5T655 872 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 LLGL2Q6P1M3 1020 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 GOLGA6L1Q8N7Z2 621 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 SH3GL2Q99962 352 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 C11orf70Q9BRQ4 267 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 TRIM7Q9C029 511 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 RAB17Q9H0T7 212 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 FAM204AQ9H8W3 233 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 FAM114A2Q9NRY5 505 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 PSD3Q9NYI0 1048 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 CNTN3Q9P232 1028 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 ITGA11Q9UKX5 1188 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 DERAQ9Y315 318 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 ATG2AQ2TAZ0 1938 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 PDCD11Q14690 1871 aaKnown RBP17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 SCN1AP35498 2009 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 FAM187AA6NFU0 413 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 PHF2O75151 1096 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 HSPA9P38646 679 aaKnown RBP17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 DHX34Q14147 1143 aaKnown RBP17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 ZBTB6Q15916 424 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 SLC13A5Q86YT5 568 aaPredicted RBP17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 IQCKQ8N0W5 287 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 PRELID2Q8N945 189 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 ZIM3Q96PE6 472 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 ADAM2Q99965 735 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 MRPL47Q9HD33 250 aaKnown RBP17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 SQORQ9Y6N5 450 aa17.48■□□□□ 0.39
CHMP1A-204ENST00000547687 LPXNO60711 386 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 ATICP31939 592 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 CHRNA3P32297 505 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 RBP5P82980 135 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 C1QBPQ07021 282 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 KCTD19Q17RG1 926 aaPredicted RBP17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 PAN2Q504Q3 1202 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 ZNF394Q53GI3 561 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 MMS22LQ6ZRQ5 1243 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 MAGOHBQ96A72 148 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 C18orf25Q96B23 403 aaPredicted RBP17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 HPDLQ96IR7 371 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 TGS1Q96RS0 853 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 TRIM51Q9BSJ1 452 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 NEUROG2Q9H2A3 272 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 TSPYL2Q9H2G4 693 aaPredicted RBP17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 DPH5Q9H2P9 285 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 TUBGCP4Q9UGJ1 667 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 GOLGA8KD6RF30 607 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 GPR182O15218 404 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 RAP1GAPP47736 663 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 PTP4A2Q12974 167 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 MAMLD1Q13495 774 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 ZDHHC14Q8IZN3 488 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 SP7Q8TDD2 431 aaPredicted RBP17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 ERP44Q9BS26 406 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 PLVAPQ9BX97 442 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 FTHL17Q9BXU8 183 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 BCO2Q9BYV7 579 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 VRTNQ9H8Y1 702 aa17.47■□□□□ 0.39
CHMP1A-204ENST00000547687 SMIM28A0A1B0GU29 152 aa17.46■□□□□ 0.39
CHMP1A-204ENST00000547687 PROSCO94903 275 aa17.46■□□□□ 0.39
CHMP1A-204ENST00000547687 CDH8P55286 799 aa17.46■□□□□ 0.39
CHMP1A-204ENST00000547687 ERVK-21P61565 698 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms