RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 C4BPAP04003 597 aaKnown RBP28.2■■■□□ 2.1
SRSF9-202ENST00000546942 PTPN1P18031 435 aaKnown RBP28.2■■■□□ 2.1
SRSF9-202ENST00000546942 DDX6P26196 483 aaKnown RBP eCLIP28.2■■■□□ 2.1
SRSF9-202ENST00000546942 RAP1GAPP47736 663 aa28.2■■■□□ 2.1
SRSF9-202ENST00000546942 CDH8P55286 799 aa28.2■■■□□ 2.1
SRSF9-202ENST00000546942 CSTF1Q05048 431 aaKnown RBP28.2■■■□□ 2.1
SRSF9-202ENST00000546942 MAML2Q8IZL2 1156 aaPredicted RBP28.2■■■□□ 2.1
SRSF9-202ENST00000546942 TRMT2BQ96GJ1 504 aaKnown RBP28.2■■■□□ 2.1
SRSF9-202ENST00000546942 LMAN1LQ9HAT1 526 aa28.2■■■□□ 2.1
SRSF9-202ENST00000546942 THG1LQ9NWX6 298 aaKnown RBP28.2■■■□□ 2.1
SRSF9-202ENST00000546942 ZMYM5Q9UJ78 669 aa28.2■■■□□ 2.1
SRSF9-202ENST00000546942 TADA3O75528 432 aa28.19■■■□□ 2.1
SRSF9-202ENST00000546942 VNN1O95497 513 aa28.19■■■□□ 2.1
SRSF9-202ENST00000546942 ANXA13P27216 316 aa28.19■■■□□ 2.1
SRSF9-202ENST00000546942 MAGEA9P43362 315 aa28.19■■■□□ 2.1
SRSF9-202ENST00000546942 CLDN10P78369 228 aa28.19■■■□□ 2.1
SRSF9-202ENST00000546942 TNK2Q07912 1038 aa28.19■■■□□ 2.1
SRSF9-202ENST00000546942 ZNF667Q5HYK9 610 aa28.19■■■□□ 2.1
SRSF9-202ENST00000546942 VSTM1Q6UX27 236 aa28.19■■■□□ 2.1
SRSF9-202ENST00000546942 MON1AQ86VX9 555 aa28.19■■■□□ 2.1
SRSF9-202ENST00000546942 USP13Q92995 863 aaPredicted RBP28.19■■■□□ 2.1
SRSF9-202ENST00000546942 MYRFLQ96LU7 910 aa28.19■■■□□ 2.1
SRSF9-202ENST00000546942 NR2F2P24468 414 aa28.18■■■□□ 2.1
SRSF9-202ENST00000546942 RPS9P46781 194 aaKnown RBP28.18■■■□□ 2.1
SRSF9-202ENST00000546942 NUCB2P80303 420 aa28.18■■■□□ 2.1
SRSF9-202ENST00000546942 PNOCQ13519 176 aa28.18■■■□□ 2.1
SRSF9-202ENST00000546942 TMEM174Q8WUU8 243 aa28.18■■■□□ 2.1
SRSF9-202ENST00000546942 CCDC34Q96HJ3 373 aa28.18■■■□□ 2.1
SRSF9-202ENST00000546942 CYP2S1Q96SQ9 504 aa28.18■■■□□ 2.1
SRSF9-202ENST00000546942 C8orf33Q9H7E9 229 aaPredicted RBP28.18■■■□□ 2.1
SRSF9-202ENST00000546942 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.18■■■□□ 2.16e-10■■■■■ 39.9
SRSF9-202ENST00000546942 GKN1Q9NS71 199 aa28.18■■■□□ 2.1
SRSF9-202ENST00000546942 TDP1Q9NUW8 608 aa28.18■■■□□ 2.1
SRSF9-202ENST00000546942 TRAF3IP3Q9Y228 551 aa28.18■■■□□ 2.1
SRSF9-202ENST00000546942 ANAPC1Q9H1A4 1944 aa28.18■■■□□ 2.1
SRSF9-202ENST00000546942 FAM163BP0C2L3 166 aa28.17■■■□□ 2.1
SRSF9-202ENST00000546942 PLCB2Q00722 1185 aa28.17■■■□□ 2.1
SRSF9-202ENST00000546942 MTAPQ13126 283 aa28.17■■■□□ 2.1
SRSF9-202ENST00000546942 KCNB1Q14721 858 aa28.17■■■□□ 2.1
SRSF9-202ENST00000546942 SMYD4Q8IYR2 804 aaPredicted RBP28.17■■■□□ 2.1
SRSF9-202ENST00000546942 ZNF687Q8N1G0 1237 aa28.17■■■□□ 2.1
SRSF9-202ENST00000546942 TMC2Q8TDI7 906 aa28.17■■■□□ 2.1
SRSF9-202ENST00000546942 CFAP54Q96N23 3096 aa28.17■■■□□ 2.1
SRSF9-202ENST00000546942 F8VP50 259 aa28.16■■■□□ 2.1
SRSF9-202ENST00000546942 SPECC1L-ADORA2AF8WAN1 911 aa28.16■■■□□ 2.1
SRSF9-202ENST00000546942 CLDN5O00501 218 aa28.16■■■□□ 2.1
SRSF9-202ENST00000546942 USP46P62068 366 aa28.16■■■□□ 2.1
SRSF9-202ENST00000546942 GUF1Q8N442 669 aaKnown RBP28.16■■■□□ 2.1
SRSF9-202ENST00000546942 B3GALNT2Q8NCR0 500 aa28.16■■■□□ 2.1
SRSF9-202ENST00000546942 SPATA17Q96L03 361 aa28.16■■■□□ 2.1
SRSF9-202ENST00000546942 SLC22A12Q96S37 553 aa28.16■■■□□ 2.1
SRSF9-202ENST00000546942 TRIM66O15016 1216 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 CKMP06732 381 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 VAMP7P51809 220 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 MLLT6P55198 1093 aaPredicted RBP28.15■■■□□ 2.1
SRSF9-202ENST00000546942 SGSM1Q2NKQ1 1148 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 TRIM68Q6AZZ1 485 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 ZC3H14Q6PJT7 736 aaKnown RBP28.15■■■□□ 2.1
SRSF9-202ENST00000546942 TXNDC11Q6PKC3 985 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 TSSK4Q6SA08 328 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 DENND5BQ6ZUT9 1274 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 SV2AQ7L0J3 742 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 B3GNT5Q9BYG0 378 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 ZNF518BQ9C0D4 1074 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 MMRN2Q9H8L6 949 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 VRTNQ9H8Y1 702 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 FBXO4Q9UKT5 387 aa28.15■■■□□ 2.1
SRSF9-202ENST00000546942 RIF1Q5UIP0 2472 aaKnown RBP28.14■■■□□ 2.1
SRSF9-202ENST00000546942 TRAV19A0A0A6YYK7 116 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 C2orf78A6NCI8 922 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 AKAP3O75969 853 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 TRIM49P0CI25 452 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 TRIM49CP0CI26 452 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 PIK3CAP42336 1068 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 CACNA2D1P54289 1103 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 IFRD2Q12894 506 aaPredicted RBP28.14■■■□□ 2.1
SRSF9-202ENST00000546942 ITPRIPL2Q3MIP1 535 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 ZACNQ401N2 412 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 C1orf220Q5T0J3 134 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 CC2D1AQ6P1N0 951 aaPredicted RBP28.14■■■□□ 2.1
SRSF9-202ENST00000546942 RALGPS2Q86X27 583 aaPredicted RBP28.14■■■□□ 2.1
SRSF9-202ENST00000546942 FMR1NBQ8N0W7 255 aaPredicted RBP28.14■■■□□ 2.1
SRSF9-202ENST00000546942 ARL14EPQ8N8R7 260 aaPredicted RBP28.14■■■□□ 2.1
SRSF9-202ENST00000546942 MED10Q9BTT4 135 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 SDCBP2Q9H190 292 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 EBF3Q9H4W6 596 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 KIF9Q9HAQ2 790 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 FRYLO94915 3013 aa28.14■■■□□ 2.1
SRSF9-202ENST00000546942 FANCMQ8IYD8 2048 aa28.13■■■□□ 2.09
SRSF9-202ENST00000546942 SOBPA7XYQ1 873 aa28.13■■■□□ 2.09
SRSF9-202ENST00000546942 IKBKBO14920 756 aa28.13■■■□□ 2.09
SRSF9-202ENST00000546942 USP17L7P0C7H9 530 aa28.13■■■□□ 2.09
SRSF9-202ENST00000546942 CHRNB1P11230 501 aa28.13■■■□□ 2.09
SRSF9-202ENST00000546942 KRT13P13646 458 aa28.13■■■□□ 2.09
SRSF9-202ENST00000546942 P4HA1P13674 534 aa28.13■■■□□ 2.09
SRSF9-202ENST00000546942 RPL13P26373 211 aaKnown RBP28.13■■■□□ 2.09
SRSF9-202ENST00000546942 CTHP32929 405 aa28.13■■■□□ 2.09
SRSF9-202ENST00000546942 ADAM9Q13443 819 aa28.13■■■□□ 2.09
SRSF9-202ENST00000546942 PON2Q15165 354 aa28.13■■■□□ 2.09
SRSF9-202ENST00000546942 SPOPLQ6IQ16 392 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms