RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 FGF19O95750 216 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 CCDC130P13994 396 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 ADORA2BP29275 332 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 KLK7P49862 253 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 PLCB2Q00722 1185 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 TFF2Q03403 129 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 CNGA2Q16280 664 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 DDR2Q16832 855 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 PPP1R26Q5T8A7 1209 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-213ENST00000546820 GRASPQ7Z6J2 395 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-213ENST00000546820 DNAJB7Q7Z6W7 309 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-213ENST00000546820 FAM35AQ86V20 835 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 FMNL3Q8IVF7 1028 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 FUKQ8N0W3 1084 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 TTC9BQ8N6N2 239 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 SHC3Q92529 594 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 PSMG2Q969U7 264 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 ZNF707Q96C28 371 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-213ENST00000546820 SPATA17Q96L03 361 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 C8orf48Q96LL4 319 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 NUP58Q9BVL2 599 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 NAA15Q9BXJ9 866 aaKnown RBP14.6□□□□□ -0.07
PTCH1-213ENST00000546820 ZNF518BQ9C0D4 1074 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 DMAP1Q9NPF5 467 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-213ENST00000546820 USP15Q9Y4E8 981 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-213ENST00000546820 FHOD1Q9Y613 1164 aa14.6□□□□□ -0.07
PTCH1-213ENST00000546820 GRXCR2A6NFK2 248 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 SOAT2O75908 522 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 NOL4O94818 638 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 STAT1P42224 750 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 ZNF132P52740 706 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 CBX2Q14781 532 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-213ENST00000546820 CCDC142Q17RM4 750 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 PAQR9Q6ZVX9 377 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 FAM71AQ8IYT1 594 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 ANKRD52Q8NB46 1076 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 GIPC2Q8TF65 315 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 SUSD6Q92537 303 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 IQCDQ96DY2 449 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 CORO1BQ9BR76 489 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 DUSP16Q9BY84 665 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 EDEM3Q9BZQ6 932 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 RBSNQ9H1K0 784 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 GANQ9H2C0 597 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 WDR6Q9NNW5 1121 aaKnown RBP14.59□□□□□ -0.07
PTCH1-213ENST00000546820 NLRC4Q9NPP4 1024 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 ASAH2Q9NR71 780 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 CEP72Q9P209 647 aa14.59□□□□□ -0.07
PTCH1-213ENST00000546820 F8VP50 259 aa14.58□□□□□ -0.08
PTCH1-213ENST00000546820 CYP26A1O43174 497 aa14.58□□□□□ -0.08
PTCH1-213ENST00000546820 RTN3O95197 1032 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-213ENST00000546820 CCDC172P0C7W6 258 aa14.58□□□□□ -0.08
PTCH1-213ENST00000546820 GNA15P30679 374 aa14.58□□□□□ -0.08
PTCH1-213ENST00000546820 PABPC1LQ4VXU2 614 aaKnown RBP14.58□□□□□ -0.08
PTCH1-213ENST00000546820 LCLAT1Q6UWP7 414 aa14.58□□□□□ -0.08
PTCH1-213ENST00000546820 PDZD4Q76G19 769 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-213ENST00000546820 ZNF397Q8NF99 534 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-213ENST00000546820 ASB2Q96Q27 587 aa14.58□□□□□ -0.08
PTCH1-213ENST00000546820 UBXN6Q9BZV1 441 aa14.58□□□□□ -0.08
PTCH1-213ENST00000546820 XPO4Q9C0E2 1151 aaKnown RBP14.58□□□□□ -0.08
PTCH1-213ENST00000546820 CSNK1G1Q9HCP0 422 aa14.58□□□□□ -0.08
PTCH1-213ENST00000546820 AVENQ9NQS1 362 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-213ENST00000546820 KRT82Q9NSB4 513 aa14.58□□□□□ -0.08
PTCH1-213ENST00000546820 COMMD8Q9NX08 183 aa14.58□□□□□ -0.08
PTCH1-213ENST00000546820 DNMT3BQ9UBC3 853 aaKnown RBP14.58□□□□□ -0.08
PTCH1-213ENST00000546820 UXTQ9UBK9 157 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-213ENST00000546820 SLC38A8A6NNN8 435 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 F8VZ95 297 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 O00370 1275 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 THAP12O43422 761 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 RHOP08100 348 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 NPR3P17342 541 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 ATF6P18850 670 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 FSHRP23945 695 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 KRT9P35527 623 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 MAP3K7CLP57077 242 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 SMAD2Q15796 467 aaKnown RBP14.57□□□□□ -0.08
PTCH1-213ENST00000546820 GOLGA7BQ2TAP0 167 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 SDHAF4Q5VUM1 108 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 DENND5BQ6ZUT9 1274 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 GAS2L3Q86XJ1 694 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 NUP93Q8N1F7 819 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 GPR152Q8TDT2 470 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 ZNF606Q8WXB4 792 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 GCNAQ96QF7 691 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 KCNK16Q96T55 309 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 PHF7Q9BWX1 381 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-213ENST00000546820 TRIM5Q9C035 493 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 PNPLA8Q9NP80 782 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTCH1-213ENST00000546820 TSPAN16Q9UKR8 245 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 MYO6Q9UM54 1294 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 MAGED2Q9UNF1 606 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-213ENST00000546820 NR2E1Q9Y466 385 aa14.57□□□□□ -0.08
PTCH1-213ENST00000546820 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTCH1-213ENST00000546820 MICAL2O94851 1124 aa14.56□□□□□ -0.08
PTCH1-213ENST00000546820 SETSIPP0DME0 302 aa14.56□□□□□ -0.08
PTCH1-213ENST00000546820 MYL4P12829 197 aa14.56□□□□□ -0.08
PTCH1-213ENST00000546820 BRD2P25440 801 aaKnown RBP14.56□□□□□ -0.08
PTCH1-213ENST00000546820 CDC25CP30307 473 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms