RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 KREMEN1Q96MU8 473 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 LRRC3Q9BY71 257 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 CBX8Q9HC52 389 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 DMAP1Q9NPF5 467 aaPredicted RBP17.85■□□□□ 0.45
CCDC38-203ENST00000546803 FAM49BQ9NUQ9 324 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 EHD2Q9NZN4 543 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 UXTQ9UBK9 157 aaPredicted RBP17.85■□□□□ 0.45
CCDC38-203ENST00000546803 CDH7Q9ULB5 785 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 PCDHB4Q9Y5E5 795 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 LGALS16A8MUM7 142 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 C2CD4DB7Z1M9 353 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 NOL4O94818 638 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 MYL4P12829 197 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 GBP2P32456 591 aaPredicted RBP17.84■□□□□ 0.45
CCDC38-203ENST00000546803 KCNMA1Q12791 1236 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 PRSS36Q5K4E3 855 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 SDHAF4Q5VUM1 108 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 ARHGAP17Q68EM7 881 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 TMEM270Q6UE05 265 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 ITFG1Q8TB96 612 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 MYRFLQ96LU7 910 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 NECAB3Q96P71 396 aaPredicted RBP17.84■□□□□ 0.45
CCDC38-203ENST00000546803 SIX2Q9NPC8 291 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 KRT82Q9NSB4 513 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 EPS15L1Q9UBC2 864 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 CNTN6Q9UQ52 1028 aa17.84■□□□□ 0.45
CCDC38-203ENST00000546803 SLC38A8A6NNN8 435 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 F8VP50 259 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 AP1G2O75843 785 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 FAM200BP0CF97 657 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 VDRP11473 427 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 ATP1A3P13637 1013 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 HMGA1P17096 107 aaKnown RBP17.83■□□□□ 0.44
CCDC38-203ENST00000546803 RFX1P22670 979 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 SP100P23497 879 aaPredicted RBP17.83■□□□□ 0.44
CCDC38-203ENST00000546803 CDC25CP30307 473 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 SSTR3P32745 418 aaPredicted RBP17.83■□□□□ 0.44
CCDC38-203ENST00000546803 SLC5A9Q2M3M2 681 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 DENND5BQ6ZUT9 1274 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 APTXQ7Z2E3 356 aaKnown RBP17.83■□□□□ 0.44
CCDC38-203ENST00000546803 GPR152Q8TDT2 470 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 FGF13Q92913 245 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 TRMT2BQ96GJ1 504 aaKnown RBP17.83■□□□□ 0.44
CCDC38-203ENST00000546803 MYADMQ96S97 322 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 CSNK1G1Q9HCP0 422 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 GDE1Q9NZC3 331 aa17.83■□□□□ 0.44
CCDC38-203ENST00000546803 GOLGA6L19H0YKK7 550 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 LAMP2P13473 410 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 ADORA2BP29275 332 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 CCR2P41597 374 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 ZNF132P52740 706 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 FILIP1LQ4L180 1135 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 SGO2Q562F6 1265 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 PPP1R26Q5T8A7 1209 aaPredicted RBP17.82■□□□□ 0.44
CCDC38-203ENST00000546803 LRSAM1Q6UWE0 723 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 LUZP1Q86V48 1076 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 NPAS3Q8IXF0 933 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 RBBP8NLQ8NC74 664 aaPredicted RBP17.82■□□□□ 0.44
CCDC38-203ENST00000546803 TCEAL4Q96EI5 215 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 GCNAQ96QF7 691 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 GPR88Q9GZN0 384 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 TSPY26PQ9H489 355 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 ZNF334Q9HCZ1 680 aaPredicted RBP17.82■□□□□ 0.44
CCDC38-203ENST00000546803 PLCB1Q9NQ66 1216 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 TMEM30AQ9NV96 361 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 DNAJC12Q9UKB3 198 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 MAGED2Q9UNF1 606 aaPredicted RBP17.82■□□□□ 0.44
CCDC38-203ENST00000546803 DAAM1Q9Y4D1 1078 aa17.82■□□□□ 0.44
CCDC38-203ENST00000546803 EYSQ5T1H1 3165 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 MOSPD3O75425 235 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 KRT5P13647 590 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 CD19P15391 556 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 GABRR2P28476 465 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 CACNA2D1P54289 1103 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 APBA1Q02410 837 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 UBXN1Q04323 297 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 STILQ15468 1287 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 KLHDC7AQ5VTJ3 777 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 DPY19L2P1Q6NXN4 242 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 GJB7Q6PEY0 223 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 GAREM2Q75VX8 874 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 NUP93Q8N1F7 819 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 SHKBP1Q8TBC3 707 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 SHC3Q92529 594 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 NXPE3Q969Y0 559 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 KCNK16Q96T55 309 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 SMOQ99835 787 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 TTLL2Q9BWV7 592 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 LSM14BQ9BX40 385 aaKnown RBP17.81■□□□□ 0.44
CCDC38-203ENST00000546803 DUSP16Q9BY84 665 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 ATXN3LQ9H3M9 355 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 IL21Q9HBE4 155 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 PNPLA8Q9NP80 782 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 COMMD8Q9NX08 183 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 ZMYM5Q9UJ78 669 aa17.81■□□□□ 0.44
CCDC38-203ENST00000546803 MTCL1Q9Y4B5 1905 aaKnown RBP17.8■□□□□ 0.44
CCDC38-203ENST00000546803 A0A1W2PRU2 124 aa17.8■□□□□ 0.44
CCDC38-203ENST00000546803 RNF225M0QZC1 329 aaPredicted RBP17.8■□□□□ 0.44
CCDC38-203ENST00000546803 RTN3O95197 1032 aaPredicted RBP17.8■□□□□ 0.44
CCDC38-203ENST00000546803 NPR3P17342 541 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms