RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 GYS1P13807 737 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 MAP4P27816 1152 aaKnown RBP13.01□□□□□ -0.33
COL4A6-209ENST00000545689 GCNT1Q02742 428 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 USP33Q8TEY7 942 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 UBE2OQ9C0C9 1292 aaKnown RBP13.01□□□□□ -0.33
COL4A6-209ENST00000545689 MROH8Q9H579 483 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 MARCOQ9UEW3 520 aaPredicted RBP13.01□□□□□ -0.33
COL4A6-209ENST00000545689 TBC1D4O60343 1298 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 OAZ1P54368 228 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 BCAT1P54687 386 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 BACE1P56817 501 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 RFX8Q6ZV50 586 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 SUGP1Q8IWZ8 645 aaKnown RBP13.01□□□□□ -0.33
COL4A6-209ENST00000545689 DTX3LQ8TDB6 740 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 FOPNLQ96NB1 174 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 IL17RBQ9NRM6 502 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 CYP3A4P08684 503 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 GLB1LQ6UWU2 654 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 FAM83AQ86UY5 434 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 ABRAQ8N0Z2 381 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 SHCBP1Q8NEM2 672 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 USP13Q92995 863 aaPredicted RBP13.01□□□□□ -0.33
COL4A6-209ENST00000545689 DUSP9Q99956 384 aaKnown RBP13.01□□□□□ -0.33
COL4A6-209ENST00000545689 AVENQ9NQS1 362 aaPredicted RBP13.01□□□□□ -0.33
COL4A6-209ENST00000545689 IL1RAPL1Q9NZN1 696 aa13.01□□□□□ -0.33
COL4A6-209ENST00000545689 HNRNPCL2B2RXH8 293 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 AKAP10O43572 662 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 PMS1P54277 932 aaKnown RBP13□□□□□ -0.33
COL4A6-209ENST00000545689 KCNK10P57789 538 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 ACCSLQ4AC99 568 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 AGAP9Q5VTM2 703 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 ZNF662Q6ZS27 426 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 RNF217Q8TC41 542 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 TMEM51Q9NW97 253 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 PIK3CDO00329 1044 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 DNAJC3Q13217 504 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 PTK2BQ14289 1009 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 SYCP2LQ5T4T6 812 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 SLC26A11Q86WA9 606 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 RUBCNLQ9H714 662 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 LRRC40Q9H9A6 602 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 IRAK4Q9NWZ3 460 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 SUPT3HB4E1H0 165 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 CLASP2O75122 1294 aaKnown RBP13□□□□□ -0.33
COL4A6-209ENST00000545689 GTF2H3Q13889 308 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 FLOT2Q14254 428 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 MTFR1Q15390 333 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 NUDT18Q6ZVK8 323 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 ANKS3Q6ZW76 656 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 IPMKQ8NFU5 416 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 ACER1Q8TDN7 264 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 AENQ8WTP8 325 aaKnown RBP13□□□□□ -0.33
COL4A6-209ENST00000545689 LZICQ8WZA0 190 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 PABPC5Q96DU9 382 aaKnown RBP13□□□□□ -0.33
COL4A6-209ENST00000545689 RBBP8Q99708 897 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 DYRK4Q9NR20 520 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 ALDH1A1P00352 501 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 THRAP10827 490 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 NCAM1P13591 858 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 GRK2P25098 689 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 SHMT1P34896 483 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 SCTRP47872 440 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 OTUD4Q01804 1114 aaKnown RBP13□□□□□ -0.33
COL4A6-209ENST00000545689 TMEM154Q6P9G4 183 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 FOXR2Q6PJQ5 311 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 ZDHHC17Q8IUH5 632 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 ATXN2LQ8WWM7 1075 aaKnown RBP13□□□□□ -0.33
COL4A6-209ENST00000545689 MTMR12Q9C0I1 747 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 ZFYVE28Q9HCC9 887 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 ITGA11Q9UKX5 1188 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 SLIT3O75094 1523 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 KIF1AQ12756 1690 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 C17orf102A2RUQ5 167 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 CAND2O75155 1236 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 SOAT2O75908 522 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 CALB2P22676 271 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 KPNB1Q14974 876 aaKnown RBP13□□□□□ -0.33
COL4A6-209ENST00000545689 TAF1CQ15572 869 aaPredicted RBP13□□□□□ -0.33
COL4A6-209ENST00000545689 TRIP10Q15642 601 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 SYTL3Q4VX76 610 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 WLSQ5T9L3 541 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 MROH9Q5TGP6 573 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 UNC45BQ8IWX7 931 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 FAM111AQ96PZ2 611 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 SIKE1Q9BRV8 207 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 DRG1Q9Y295 367 aaKnown RBP13□□□□□ -0.33
COL4A6-209ENST00000545689 AK9Q5TCS8 1911 aa13□□□□□ -0.33
COL4A6-209ENST00000545689 H0Y626 953 aa12.99□□□□□ -0.33
COL4A6-209ENST00000545689 NCAM2O15394 837 aa12.99□□□□□ -0.33
COL4A6-209ENST00000545689 MAN1A2O60476 641 aa12.99□□□□□ -0.33
COL4A6-209ENST00000545689 TRIM16O95361 564 aa12.99□□□□□ -0.33
COL4A6-209ENST00000545689 ADRM1Q16186 407 aa12.99□□□□□ -0.33
COL4A6-209ENST00000545689 PATL1Q86TB9 770 aaKnown RBP12.99□□□□□ -0.33
COL4A6-209ENST00000545689 MCOLN2Q8IZK6 566 aa12.99□□□□□ -0.33
COL4A6-209ENST00000545689 TBCBQ99426 244 aa12.99□□□□□ -0.33
COL4A6-209ENST00000545689 PRDM16Q9HAZ2 1276 aa12.99□□□□□ -0.33
COL4A6-209ENST00000545689 CD274Q9NZQ7 290 aa12.99□□□□□ -0.33
COL4A6-209ENST00000545689 AIM2O14862 343 aa12.99□□□□□ -0.33
COL4A6-209ENST00000545689 ADCY3O60266 1144 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms