RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ADGRG2Q8IZP9 1017 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 CXorf38Q8TB03 319 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 SPATA18Q8TC71 538 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 SH3RF2Q8TEC5 729 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 PI4K2AQ9BTU6 479 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 MSTO1Q9BUK6 570 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 GPSM3Q9Y4H4 160 aa15.85■□□□□ 0.13
RTN3-214ENST00000545432 SMG1Q96Q15 3661 aaKnown RBP15.84■□□□□ 0.13
RTN3-214ENST00000545432 SLC26A4O43511 780 aa15.84■□□□□ 0.13
RTN3-214ENST00000545432 NFATC1O95644 943 aa15.84■□□□□ 0.13
RTN3-214ENST00000545432 ABCD1P33897 745 aa15.84■□□□□ 0.13
RTN3-214ENST00000545432 EIF2DP41214 584 aaKnown RBP15.84■□□□□ 0.13
RTN3-214ENST00000545432 PTGER3P43115 390 aa15.84■□□□□ 0.13
RTN3-214ENST00000545432 KIR2DL1P43626 348 aaPredicted RBP15.84■□□□□ 0.13
RTN3-214ENST00000545432 NEK4P51957 841 aa15.84■□□□□ 0.13
RTN3-214ENST00000545432 SIM1P81133 766 aaPredicted RBP15.84■□□□□ 0.13
RTN3-214ENST00000545432 ATP2C1P98194 919 aaPredicted RBP15.84■□□□□ 0.13
RTN3-214ENST00000545432 HNRNPDQ14103 355 aaKnown RBP15.84■□□□□ 0.13
RTN3-214ENST00000545432 SOWAHCQ53LP3 525 aaPredicted RBP15.84■□□□□ 0.13
RTN3-214ENST00000545432 C2orf27AQ580R0 203 aa15.84■□□□□ 0.13
RTN3-214ENST00000545432 SDHAF4Q5VUM1 108 aa15.84■□□□□ 0.13
RTN3-214ENST00000545432 ARL14EPQ8N8R7 260 aaPredicted RBP15.84■□□□□ 0.13
RTN3-214ENST00000545432 IL17RCQ8NAC3 791 aa15.84■□□□□ 0.13
RTN3-214ENST00000545432 STKLD1Q8NE28 680 aa15.84■□□□□ 0.13
RTN3-214ENST00000545432 FAM212AQ96EL1 285 aa15.84■□□□□ 0.13
RTN3-214ENST00000545432 CEP295NLQ96MC4 621 aa15.84■□□□□ 0.13
RTN3-214ENST00000545432 ST6GALNAC4Q9H4F1 302 aa15.84■□□□□ 0.13
RTN3-214ENST00000545432 CAPN10Q9HC96 672 aa15.84■□□□□ 0.13
RTN3-214ENST00000545432 MAGED2Q9UNF1 606 aaPredicted RBP15.84■□□□□ 0.13
RTN3-214ENST00000545432 ANK1P16157 1881 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 SPAARA0A1B0GVQ0 90 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 ANKRD63C9JTQ0 380 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 GABRDO14764 452 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 ALDH1A2O94788 518 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 CYP2F1P24903 491 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 PNPLA4P41247 253 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 ACOT2P49753 483 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 HMGN5P82970 282 aaKnown RBP15.83■□□□□ 0.12
RTN3-214ENST00000545432 TSPY1Q01534 308 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 SV2CQ496J9 727 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 ZC2HC1CQ53FD0 456 aaPredicted RBP15.83■□□□□ 0.12
RTN3-214ENST00000545432 INTS6LQ5JSJ4 861 aaKnown RBP15.83■□□□□ 0.12
RTN3-214ENST00000545432 KIAA1211LQ6NV74 962 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 LIMS2Q7Z4I7 341 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 PDCL2Q8N4E4 241 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 FUBP3Q96I24 572 aaKnown RBP eCLIP15.83■□□□□ 0.12
RTN3-214ENST00000545432 REEP2Q9BRK0 252 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 SLC6A14Q9UN76 642 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 L1RE1Q9UN81 338 aa15.83■□□□□ 0.12
RTN3-214ENST00000545432 ZNF638Q14966 1978 aaKnown RBP15.83■□□□□ 0.12
RTN3-214ENST00000545432 TNRC6BQ9UPQ9 1833 aaKnown RBP15.82■□□□□ 0.12
RTN3-214ENST00000545432 MYH11P35749 1972 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 C2orf78A6NCI8 922 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 SGK1O00141 431 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 TRAK2O60296 914 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 OLFM2O95897 454 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 CKMP06732 381 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 HDCP19113 662 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 MAGEA11P43364 429 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 FAM193AP78312 1265 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 MESP2Q0VG99 397 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 BYSLQ13895 437 aaKnown RBP15.82■□□□□ 0.12
RTN3-214ENST00000545432 ZNF423Q2M1K9 1284 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 SLFN12LQ6IEE8 588 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 FAM171BQ6P995 826 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 TMEM86AQ8N2M4 240 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 CCDC33Q8N5R6 958 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 FRMD1Q8N878 549 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 CEP76Q8TAP6 659 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 WHAMMQ8TF30 809 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 RLN3Q8WXF3 142 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 SPATA17Q96L03 361 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 PARVGQ9HBI0 331 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 DNAAF2Q9NVR5 837 aaKnown RBP15.82■□□□□ 0.12
RTN3-214ENST00000545432 GDAP2Q9NXN4 497 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 LIMCH1Q9UPQ0 1083 aa15.82■□□□□ 0.12
RTN3-214ENST00000545432 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 ADAM23O75077 832 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 GJB3O75712 270 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 CYP17A1P05093 508 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 SERPINF2P08697 491 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 CD59P13987 128 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 PDE6CP51160 858 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 SLC7A9P82251 487 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 DUOXA1Q1HG43 343 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 FREM2Q5SZK8 3169 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 LYSMD4Q5XG99 296 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 ARL6IP4Q66PJ3 421 aaKnown RBP15.81■□□□□ 0.12
RTN3-214ENST00000545432 CCDC83Q8IWF9 413 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 TMEFF1Q8IYR6 380 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 CHCHD4Q8N4Q1 142 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 FSIP1Q8NA03 581 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 SPACA7Q96KW9 195 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 ZNF560Q96MR9 790 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 POLMQ9NP87 494 aaPredicted RBP15.81■□□□□ 0.12
RTN3-214ENST00000545432 BLOC1S4Q9NUP1 217 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 GTF3C4Q9UKN8 822 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 AGO2Q9UKV8 859 aaKnown RBP15.81■□□□□ 0.12
RTN3-214ENST00000545432 PLXND1Q9Y4D7 1925 aa15.81■□□□□ 0.12
RTN3-214ENST00000545432 ACACAQ13085 2346 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms