RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 MMP17Q9ULZ9 603 aa12.37□□□□□ -0.43
TMEM258-208ENST00000545210 LIMCH1Q9UPQ0 1083 aa12.37□□□□□ -0.43
TMEM258-208ENST00000545210 MSRB2Q9Y3D2 182 aa12.37□□□□□ -0.43
TMEM258-208ENST00000545210 PCDH15Q96QU1 1955 aa12.37□□□□□ -0.43
TMEM258-208ENST00000545210 GON4LQ3T8J9 2241 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 MAP3K13O43283 966 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 NOL4O94818 638 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 HNRNPLP14866 589 aaKnown RBP eCLIP12.36□□□□□ -0.43
TMEM258-208ENST00000545210 ACAT1P24752 427 aaKnown RBP12.36□□□□□ -0.43
TMEM258-208ENST00000545210 OPRD1P41143 372 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 PTGER3P43115 390 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 RPL10AP62906 217 aaKnown RBP12.36□□□□□ -0.43
TMEM258-208ENST00000545210 SIM1P81133 766 aaPredicted RBP12.36□□□□□ -0.43
TMEM258-208ENST00000545210 DHX8Q14562 1220 aaKnown RBP12.36□□□□□ -0.43
TMEM258-208ENST00000545210 NFE2Q16621 373 aaPredicted RBP12.36□□□□□ -0.43
TMEM258-208ENST00000545210 CCDC142Q17RM4 750 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 ADALQ6DHV7 355 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 LPCAT2Q7L5N7 544 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 SFTPA1Q8IWL2 248 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 OLIG1Q8TAK6 271 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 LRRC15Q8TF66 581 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 FNBP1Q96RU3 617 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 GCNT4Q9P109 453 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 ATXN2Q99700 1313 aaKnown RBP12.36□□□□□ -0.43
TMEM258-208ENST00000545210 CACNA1EQ15878 2313 aa12.36□□□□□ -0.43
TMEM258-208ENST00000545210 LAMA5O15230 3695 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 PLXNB3Q9ULL4 1909 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 IGSF10Q6WRI0 2623 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 VWA3AA6NCI4 1184 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 TULP1O00294 542 aaPredicted RBP12.35□□□□□ -0.43
TMEM258-208ENST00000545210 TNFRSF10BO14763 440 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 TRAK2O60296 914 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 FAM13AO94988 1023 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 NFATC1O95644 943 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 HDCP19113 662 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 SCP2P22307 547 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 P2RY2P41231 377 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 HMGN5P82970 282 aaKnown RBP12.35□□□□□ -0.43
TMEM258-208ENST00000545210 ZXDBP98169 803 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 ATP2C1P98194 919 aaPredicted RBP12.35□□□□□ -0.43
TMEM258-208ENST00000545210 KCNB1Q14721 858 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 GAB4Q2WGN9 574 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 TMEM119Q4V9L6 283 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 PIP4P1Q86T03 277 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 GPBP1Q86WP2 473 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 SYT12Q8IV01 421 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 PDCL2Q8N4E4 241 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 KCTD17Q8N5Z5 321 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 ALLCQ8N6M5 410 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 FSIP1Q8NA03 581 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 LEO1Q8WVC0 666 aaPredicted RBP12.35□□□□□ -0.43
TMEM258-208ENST00000545210 SPACA7Q96KW9 195 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 ZNF560Q96MR9 790 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 IKZF4Q9H2S9 585 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 ZHX3Q9H4I2 956 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 PARVGQ9HBI0 331 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 ABCB6Q9NP58 842 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 FSCN3Q9NQT6 498 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 DDX43Q9NXZ2 648 aaKnown RBP12.35□□□□□ -0.43
TMEM258-208ENST00000545210 MBD1Q9UIS9 605 aaPredicted RBP12.35□□□□□ -0.43
TMEM258-208ENST00000545210 GTF3C4Q9UKN8 822 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 AGO2Q9UKV8 859 aaKnown RBP12.35□□□□□ -0.43
TMEM258-208ENST00000545210 L1RE1Q9UN81 338 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 PTPRBP23467 1997 aa12.35□□□□□ -0.43
TMEM258-208ENST00000545210 SGK1O00141 431 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 TAF4O00268 1085 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 ALDH1A2O94788 518 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 KLF8O95600 359 aaPredicted RBP12.34□□□□□ -0.43
TMEM258-208ENST00000545210 CFIP05156 583 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 ZNF131P52739 623 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 MRPS21P82921 87 aaKnown RBP12.34□□□□□ -0.43
TMEM258-208ENST00000545210 GTF2BQ00403 316 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 MESP2Q0VG99 397 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 SEMA3BQ13214 749 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 INTS6LQ5JSJ4 861 aaKnown RBP12.34□□□□□ -0.43
TMEM258-208ENST00000545210 ERICH6BQ5W0A0 696 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 SLC23A3Q6PIS1 610 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 CRELD2Q6UXH1 353 aaPredicted RBP12.34□□□□□ -0.43
TMEM258-208ENST00000545210 SCN4BQ8IWT1 228 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 IL17RCQ8NAC3 791 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 TXNDC5Q8NBS9 432 aaKnown RBP12.34□□□□□ -0.43
TMEM258-208ENST00000545210 WHAMMQ8TF30 809 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 HMGB4Q8WW32 186 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 PKMYT1Q99640 499 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 ACBD6Q9BR61 282 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 GTPBP2Q9BX10 602 aaKnown RBP12.34□□□□□ -0.43
TMEM258-208ENST00000545210 BCCIPQ9P287 314 aaKnown RBP eCLIP12.34□□□□□ -0.43
TMEM258-208ENST00000545210 ARHGAP26Q9UNA1 814 aa12.34□□□□□ -0.43
TMEM258-208ENST00000545210 HCRTO43612 131 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 HUS1O60921 280 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 CYP17A1P05093 508 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 ITGB3P05106 788 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 KRT18P05783 430 aaKnown RBP12.33□□□□□ -0.44
TMEM258-208ENST00000545210 TCF3P15923 654 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 ITPKAP23677 461 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 POLR2BP30876 1174 aaKnown RBP12.33□□□□□ -0.44
TMEM258-208ENST00000545210 TIE1P35590 1138 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 PNPLA4P41247 253 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 SLC6A11P48066 632 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms