RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 MTNR1BP49286 362 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 ZXDAP98168 799 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 DUSP4Q13115 394 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 SMAD4Q13485 552 aaKnown RBP6.93□□□□□ -1.3
CPSF7-222ENST00000544585 SEC23AQ15436 765 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 ALX1Q15699 326 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.93□□□□□ -1.3
CPSF7-222ENST00000544585 ATAT1Q5SQI0 421 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 ZMYM1Q5SVZ6 1142 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 GPATCH4Q5T3I0 446 aaKnown RBP6.93□□□□□ -1.3
CPSF7-222ENST00000544585 ARHGEF16Q5VV41 709 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 BTBD8Q5XKL5 378 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 SLC30A10Q6XR72 485 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-222ENST00000544585 SERINC5Q86VE9 423 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 PHYKPLQ8IUZ5 450 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 GRAMD1CQ8IYS0 662 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 ENAHQ8N8S7 591 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-222ENST00000544585 PRSS33Q8NF86 280 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 PPTC7Q8NI37 304 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 ATOH1Q92858 354 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-222ENST00000544585 ATP6V0A1Q93050 837 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 HPS3Q969F9 1004 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 FAM193BQ96PV7 902 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-222ENST00000544585 RMDN3Q96TC7 470 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 ACO2Q99798 780 aaKnown RBP6.93□□□□□ -1.3
CPSF7-222ENST00000544585 GTPBP4Q9BZE4 634 aaKnown RBP6.93□□□□□ -1.3
CPSF7-222ENST00000544585 PHTF1Q9UMS5 762 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 DNM3Q9UQ16 869 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 MRPL11Q9Y3B7 192 aaKnown RBP6.93□□□□□ -1.3
CPSF7-222ENST00000544585 TRANK1O15050 2925 aa6.93□□□□□ -1.3
CPSF7-222ENST00000544585 CHD8Q9HCK8 2581 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 MYH4Q9Y623 1939 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 A0A1W2PQJ5 194 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 CCDC189A1A4V9 331 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 PRAMEF25A6NGN4 478 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 LOC730098B7Z3J9 87 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 SLC27A2O14975 620 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 FOXP2O15409 715 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 SH3BP5O60239 455 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 CLEC2LP0C7M8 214 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 SNHG28P0DPA3 235 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 HSPD1P10809 573 aaKnown RBP6.92□□□□□ -1.3
CPSF7-222ENST00000544585 PCP11498 1178 aaKnown RBP6.92□□□□□ -1.3
CPSF7-222ENST00000544585 RHCEP18577 417 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 AVPR2P30518 371 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 KIR2DL1P43626 348 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-222ENST00000544585 KIR2DL2P43627 348 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-222ENST00000544585 NT5C2P49902 561 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 SLC5A3P53794 718 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 ZNF200P98182 395 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-222ENST00000544585 RHDQ02161 417 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 ZNF543Q08ER8 600 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 HYAL1Q12794 435 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 TCF15Q12870 199 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 UAP1L1Q3KQV9 507 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 CCDC178Q5BJE1 867 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 CATSPEREQ5SY80 951 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 CELF3Q5SZQ8 465 aaKnown RBP6.92□□□□□ -1.3
CPSF7-222ENST00000544585 TIGD7Q6NT04 549 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-222ENST00000544585 LILRA6Q6PI73 481 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 SLCO6A1Q86UG4 719 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 CAMKK1Q8N5S9 505 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 ZBTB34Q8NCN2 500 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 SHKBP1Q8TBC3 707 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 TBC1D5Q92609 795 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 P2RX5Q93086 422 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 EVI5LQ96CN4 794 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 RAX2Q96IS3 184 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 HRASLS5Q96KN8 279 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 SLC2A13Q96QE2 648 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 SEC62Q99442 399 aaKnown RBP6.92□□□□□ -1.3
CPSF7-222ENST00000544585 IFIH1Q9BYX4 1025 aaKnown RBP6.92□□□□□ -1.3
CPSF7-222ENST00000544585 RNPEPQ9H4A4 650 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 SMOC1Q9H4F8 434 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 DCTPP1Q9H773 170 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 PPCSQ9HAB8 311 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 PRDM16Q9HAZ2 1276 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 INCENPQ9NQS7 918 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 ABCB11O95342 1321 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 MYO7AQ13402 2215 aa6.92□□□□□ -1.3
CPSF7-222ENST00000544585 ZNF318Q5VUA4 2279 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 PROB1E7EW31 1015 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 TPP1O14773 563 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 HGSO14964 777 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-222ENST00000544585 GSC2O15499 205 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 DTNBO60941 627 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 NTRK1P04629 796 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 MYBP10242 640 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 CTNNB1P35222 781 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 CHRNA4P43681 627 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 NDUFV1P49821 464 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 EPHA5P54756 1037 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 MANFP55145 182 aaKnown RBP6.91□□□□□ -1.3
CPSF7-222ENST00000544585 MRPS9P82933 396 aaKnown RBP6.91□□□□□ -1.3
CPSF7-222ENST00000544585 DLX2Q07687 328 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-222ENST00000544585 SIGLEC14Q08ET2 396 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 COASYQ13057 564 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 TUSC3Q13454 348 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 USH1GQ495M9 461 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms