RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 MXI1P50539 228 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 KPNA1P52294 538 aaPredicted RBP5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 STARD6P59095 220 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 NTHL1P78549 312 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 E2F5Q15329 346 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 MLF2Q15773 248 aaPredicted RBP5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 TPD52L1Q16890 204 aaPredicted RBP5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 SOWAHAQ2M3V2 549 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 ZACNQ401N2 412 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 CCDC40Q4G0X9 1142 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 PRSS36Q5K4E3 855 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 GPR158Q5T848 1215 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 LMBRD2Q68DH5 695 aaPredicted RBP5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 SMYD5Q6GMV2 418 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 FAM171BQ6P995 826 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 FOXR2Q6PJQ5 311 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 PARM1Q6UWI2 310 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 B3GALNT2Q8NCR0 500 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 KIAA0895Q8NCT3 520 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 FBXL13Q8NEE6 735 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 OR5B17Q8NGF7 314 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 ITFG1Q8TB96 612 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 BPIFB1Q8TDL5 484 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 ING5Q8WYH8 240 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 SECISBP2LQ93073 1101 aaKnown RBP5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 SMARCD1Q96GM5 515 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 C8orf48Q96LL4 319 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 PI4K2AQ9BTU6 479 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 NT5C1AQ9BXI3 368 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 FGFBP2Q9BYJ0 223 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 NACA2Q9H009 215 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 KCTD10Q9H3F6 313 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 GDPD2Q9HCC8 539 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 HCFC1R1Q9NWW0 138 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 CEP72Q9P209 647 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 ARMCX3Q9UH62 379 aaPredicted RBP5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 GTF3C4Q9UKN8 822 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 UNC79Q9P2D8 2635 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 MYH15Q9Y2K3 1946 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 NAV2Q8IVL1 2488 aa5.97□□□□□ -1.45
CLSTN3-215ENST00000544584 LRRIQ3A6PVS8 624 aaPredicted RBP5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 RBAK-RBAKDNI3L0D1 243 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 PPEF2O14830 753 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 P4HA2O15460 535 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 ATG13O75143 517 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 CEBPBP17676 345 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 BDNFP23560 247 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 CCNE1P24864 410 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 CYP2F1P24903 491 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 YWHAQP27348 245 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 CASP1P29466 404 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 GDI1P31150 447 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 HOXD13P35453 343 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 RPS9P46781 194 aaKnown RBP5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 SNX16P57768 344 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 MYL6P60660 151 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 NOP14P78316 857 aaKnown RBP5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 GPC5P78333 572 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 GRSF1Q12849 480 aaKnown RBP eCLIP5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 PNOCQ13519 176 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 ZNF268Q14587 947 aaPredicted RBP5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 UBXN2BQ14CS0 331 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 PDGFRLQ15198 375 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 TEAD2Q15562 447 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 RSPO4Q2I0M5 234 aaPredicted RBP5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 MDH1BQ5I0G3 518 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 CT47A1Q5JQC4 288 aaPredicted RBP5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 FAM78AQ5JUQ0 283 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 DGKKQ5KSL6 1271 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 SV2AQ7L0J3 742 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 LIMS2Q7Z4I7 341 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 FILIP1Q7Z7B0 1213 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 RALGPS2Q86X27 583 aaPredicted RBP5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 ARID3BQ8IVW6 561 aaPredicted RBP5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 FAM114A1Q8IWE2 563 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 CMTM8Q8IZV2 173 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 NUP93Q8N1F7 819 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 ARHGAP18Q8N392 663 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 SYNPOQ8N3V7 929 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 GPR161Q8N6U8 529 aaKnown RBP5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 OR10T2Q8NGX3 314 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 GPR152Q8TDT2 470 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 FGF14Q92915 247 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 ATP2A3Q93084 1043 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 MYRFLQ96LU7 910 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 KXD1Q9BQD3 176 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 FAM126AQ9BYI3 521 aaPredicted RBP5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 NIF3L1Q9GZT8 377 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 GOLPH3LQ9H4A5 285 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 TBC1D17Q9HA65 648 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 DMAP1Q9NPF5 467 aaPredicted RBP5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 TDP1Q9NUW8 608 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 TBC1D14Q9P2M4 693 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 HESX1Q9UBX0 185 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 CDH22Q9UJ99 828 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 KIAA1257Q9ULG3 409 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 CA14Q9ULX7 337 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 MAPK8IP1Q9UQF2 711 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 PCDHA5Q9Y5H7 936 aa5.96□□□□□ -1.46
CLSTN3-215ENST00000544584 FRYQ5TBA9 3013 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms