RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 OTOL1A6NHN0 477 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 AKAP3O75969 853 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 STAU1O95793 577 aaKnown RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 PTPN1P18031 435 aaKnown RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 AVPR1AP37288 418 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 MAGEA11P43364 429 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 RAP1GAPP47736 663 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 TNNC1P63316 161 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 CSTF1Q05048 431 aaKnown RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 MTAPQ13126 283 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 NCOA4Q13772 614 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 CEP135Q66GS9 1140 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 TSSK4Q6SA08 328 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 C4orf50Q6ZRC1 276 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 MON1AQ86VX9 555 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 SMYD4Q8IYR2 804 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 CELF5Q8N6W0 485 aaKnown RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 BPIFB1Q8TDL5 484 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 CSGALNACT1Q8TDX6 532 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 SDCBP2Q9H190 292 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 LMAN1LQ9HAT1 526 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 RBM12Q9NTZ6 932 aaKnown RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 OBP2AQ9NY56 170 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 TRAF3IP3Q9Y228 551 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 MRPS17Q9Y2R5 130 aaKnown RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 A8MXQ7 604 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 CLDN5O00501 218 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 LAMTOR5O43504 91 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 ATICP31939 592 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 GRIK1P39086 918 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 RPS9P46781 194 aaKnown RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 KPNA1P52294 538 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 PNOCQ13519 176 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 GAS6Q14393 721 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 ARHGAP29Q52LW3 1261 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 TRIM68Q6AZZ1 485 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 SCARA5Q6ZMJ2 495 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 SV2AQ7L0J3 742 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 MRPS31Q92665 395 aaKnown RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 ERCC4Q92889 916 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 SYAP1Q96A49 352 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 EEF2KMTQ96G04 330 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 TRMT2BQ96GJ1 504 aaKnown RBP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 FAM83CQ9BQN1 747 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 ZNF518BQ9C0D4 1074 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 VRTNQ9H8Y1 702 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 TRPC7Q9HCX4 862 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHEK1-218ENST00000544373 GKN1Q9NS71 199 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 TDP1Q9NUW8 608 aa11.43□□□□□ -0.58
CHEK1-218ENST00000544373 TCHHQ07283 1943 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 C2orf78A6NCI8 922 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 F8VP50 259 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 SPECC1L-ADORA2AF8WAN1 911 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 FAM163BP0C2L3 166 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 TRIM49P0CI25 452 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 TRIM49CP0CI26 452 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 CHRNB1P11230 501 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 BECN1Q14457 450 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 MAPRE1Q15691 268 aaKnown RBP11.42□□□□□ -0.58
CHEK1-218ENST00000544373 ZNF699Q32M78 642 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 ZACNQ401N2 412 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 SPOPLQ6IQ16 392 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 VSTM1Q6UX27 236 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 FMR1NBQ8N0W7 255 aaPredicted RBP11.42□□□□□ -0.58
CHEK1-218ENST00000544373 CHFRQ96EP1 664 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 SPATA17Q96L03 361 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 B3GNT5Q9BYG0 378 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 HPS4Q9NQG7 708 aa11.42□□□□□ -0.58
CHEK1-218ENST00000544373 NCAM2O15394 837 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 CALUO43852 315 aaPredicted RBP11.41□□□□□ -0.58
CHEK1-218ENST00000544373 CLSTN1O94985 981 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 NR2F2P24468 414 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 DDX6P26196 483 aaKnown RBP eCLIP11.41□□□□□ -0.58
CHEK1-218ENST00000544373 HOXC13P31276 330 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 CTHP32929 405 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 AP3M2P53677 418 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 MLLT6P55198 1093 aaPredicted RBP11.41□□□□□ -0.58
CHEK1-218ENST00000544373 ZXDBP98169 803 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 ORC1Q13415 861 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 KCNB1Q14721 858 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 ZCWPW2Q504Y3 356 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 ZNF667Q5HYK9 610 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 DENND5BQ6ZUT9 1274 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 PAQR9Q6ZVX9 377 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 GUF1Q8N442 669 aaKnown RBP11.41□□□□□ -0.58
CHEK1-218ENST00000544373 ARL14EPQ8N8R7 260 aaPredicted RBP11.41□□□□□ -0.58
CHEK1-218ENST00000544373 B3GALNT2Q8NCR0 500 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 TTC16Q8NEE8 873 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 ENGASEQ8NFI3 743 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 TMC2Q8TDI7 906 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 KCNK16Q96T55 309 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 CHRDQ9H2X0 955 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 EBF3Q9H4W6 596 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 C8orf33Q9H7E9 229 aaPredicted RBP11.41□□□□□ -0.58
CHEK1-218ENST00000544373 C2orf42Q9NWW7 574 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 GCNT4Q9P109 453 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 UXTQ9UBK9 157 aaPredicted RBP11.41□□□□□ -0.58
CHEK1-218ENST00000544373 HMGXB4Q9UGU5 601 aa11.41□□□□□ -0.58
CHEK1-218ENST00000544373 FRMD4BQ9Y2L6 1034 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms